RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 CRYBG2Q8N1P7 616 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 PTCD2Q8WV60 388 aaKnown RBP8.04□□□□□ -1.12
NEK1-208ENST00000512193 ABHD8Q96I13 439 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 PANX1Q96RD7 426 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 RAD21L1Q9H4I0 556 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 PLGRKTQ9HBL7 147 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 SELENONQ9NZV5 590 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 SNX6Q9UNH7 406 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 SAMHD1Q9Y3Z3 626 aaKnown RBP8.04□□□□□ -1.12
NEK1-208ENST00000512193 ARL5CA6NH57 179 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 RFXANKO14593 260 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 PIP5K1BO14986 540 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 SIX3O95343 332 aaPredicted RBP8.04□□□□□ -1.12
NEK1-208ENST00000512193 CKBP12277 381 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 ITGAXP20702 1163 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 PRKCHP24723 683 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 CXCR3P49682 368 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 RPS7P62081 194 aaKnown RBP8.04□□□□□ -1.12
NEK1-208ENST00000512193 C1DQ13901 141 aaKnown RBP8.04□□□□□ -1.12
NEK1-208ENST00000512193 NR1D2Q14995 579 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 IL23RQ5VWK5 629 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 USP45Q70EL2 814 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 ZNF605Q86T29 641 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 CYP4Z1Q86W10 505 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 PHACTR4Q8IZ21 702 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 ZNF540Q8NDQ6 660 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 GIPC3Q8TF64 312 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 NACC2Q96BF6 587 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 SLC39A3Q9BRY0 314 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 MRPL9Q9BYD2 267 aaKnown RBP8.04□□□□□ -1.12
NEK1-208ENST00000512193 ZC4H2Q9NQZ6 224 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 RAB26Q9ULW5 256 aa8.04□□□□□ -1.12
NEK1-208ENST00000512193 SCN11AQ9UI33 1791 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 MYH13Q9UKX3 1938 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 PDZK1P1A8MUH7 402 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 NRP1O14786 923 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 DBTP11182 482 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 IMPDH2P12268 514 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 PRDX6P30041 224 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 ADSLP30566 484 aaPredicted RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 KRT20P35900 424 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 POLR2JP52435 117 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 ABRQ12979 859 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 MOGSQ13724 837 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 DPYSQ14117 519 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 ACAP2Q15057 778 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 SPANXN2Q5MJ10 180 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 SLC9A4Q6AI14 798 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 UTS2BQ765I0 119 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 CROCCP3Q8IVE0 287 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 RTL3Q8N8U3 475 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 REXO5Q96IC2 774 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 CAMKK2Q96RR4 588 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 PCYT2Q99447 389 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 COPS8Q99627 209 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 ACBD6Q9BR61 282 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 TSEN34Q9BSV6 310 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 FAM124BQ9H5Z6 455 aaPredicted RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
NEK1-208ENST00000512193 OXSMQ9NWU1 459 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 RAI2Q9Y5P3 530 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 MYO18AQ92614 2054 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 BBIP1A8MTZ0 92 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 STK25O00506 426 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 KLF11O14901 512 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 RFPL1O75677 317 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 OR4F21O95013 312 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 PCDH8O95206 1070 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 TBX18O95935 607 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 GOT2P00505 430 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 AHSGP02765 367 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 WARSP23381 471 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 AQP1P29972 269 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 FLT3LGP49771 235 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 YBEYP58557 167 aaPredicted RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 POLR2LP62875 67 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 LCP2Q13094 533 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 SIM2Q14190 667 aaPredicted RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 ADGRE1Q14246 886 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 RAB6CQ53S08 254 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 INO80DQ53TQ3 878 aaPredicted RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 ARMCX4Q5H9R4 360 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 DOK6Q6PKX4 331 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 APOLD1Q96LR9 279 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 YIPF2Q9BWQ6 316 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 TXLNGYQ9BZA5 131 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 NUAK2Q9H093 628 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 RAB6CQ9H0N0 254 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 CYTH4Q9UIA0 394 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 TRIM24O15164 1050 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 DLX3O60479 287 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 MFN2O95140 757 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 C1RP00736 705 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
NEK1-208ENST00000512193 CYP3A5P20815 502 aa8.03□□□□□ -1.12
NEK1-208ENST00000512193 PPP2R1BP30154 601 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms