RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 THAP4Q8WY91 577 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 CPXM1Q96SM3 734 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 SLC38A3Q99624 504 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 TSG101Q99816 390 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 TSPY26PQ9H489 355 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 WDR26Q9H7D7 661 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 ACP6Q9NPH0 428 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 LHX9Q9NQ69 397 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 SAMSN1Q9NSI8 373 aaKnown RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 TRNAU1APQ9NX07 287 aaKnown RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 SUFUQ9UMX1 484 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 MYO7BQ6PIF6 2116 aa9.09□□□□□ -0.96
NUP54-211ENST00000512151 BICDL2A1A5D9 508 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 A6NL46 340 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 E2F3O00716 465 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 ZNF185O15231 689 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 PRICKLE3O43900 615 aaPredicted RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 STX10O60499 249 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 HSF2BPO75031 334 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 DAB1O75553 588 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 TMCC1O94876 653 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 NADKO95544 446 aaPredicted RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 GLI1P08151 1106 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 XPAP23025 273 aaPredicted RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 CLCN1P35523 988 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 ADCY8P40145 1251 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 GARSP41250 739 aaKnown RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 NOP2P46087 812 aaKnown RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 FASLGP48023 281 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 PPM1FP49593 454 aaPredicted RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 NDST2P52849 883 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 GFERP55789 205 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 PER3P56645 1201 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 FKBP3Q00688 224 aaKnown RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 MTA1Q13330 715 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 DCAF17Q5H9S7 520 aaPredicted RBP9.08□□□□□ -0.96
NUP54-211ENST00000512151 TCERG1LQ5VWI1 586 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 PNCKQ6P2M8 343 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 OLFML1Q6UWY5 402 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 LRRC31Q6UY01 552 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 RRAGAQ7L523 313 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 LUZP1Q86V48 1076 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 ARHGEF19Q8IW93 802 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 WDTC1Q8N5D0 677 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 GDAP1L1Q96MZ0 367 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 NPY6RQ99463 290 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 TTYH3Q9C0H2 523 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 KLC2Q9H0B6 622 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 RBSNQ9H1K0 784 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 WDCPQ9H6R7 721 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 FANCLQ9NW38 375 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 ASNSD1Q9NWL6 643 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 COPG2Q9UBF2 871 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 LNPEPQ9UIQ6 1025 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 PADI1Q9ULC6 663 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 MFHAS1Q9Y4C4 1052 aa9.08□□□□□ -0.96
NUP54-211ENST00000512151 CXorf51AA0A1B0GTR3 108 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 C21orf140B9A014 251 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 F5H423 210 aaPredicted RBP9.07□□□□□ -0.96
NUP54-211ENST00000512151 CETN3O15182 167 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 SPAG6O75602 509 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 MYCLP1P12525 358 aaPredicted RBP9.07□□□□□ -0.96
NUP54-211ENST00000512151 RPL13P26373 211 aaKnown RBP9.07□□□□□ -0.96
NUP54-211ENST00000512151 PTPN4P29074 926 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 ACTR1BP42025 376 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 MAPK9P45984 424 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 SUOXP51687 545 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 ACTR1AP61163 376 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 MYL5Q02045 173 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 NFATC2Q13469 925 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 RAPSNQ13702 412 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 BRMS1LQ5PSV4 323 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 FAM69BQ5VUD6 431 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 CDKAL1Q5VV42 579 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 LIPIQ6XZB0 460 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 PPM1KQ8N3J5 372 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 SFRP1Q8N474 314 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 RNF214Q8ND24 703 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 ST6GALNAC3Q8NDV1 305 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 LMO3Q8TAP4 145 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 ADAMTS17Q8TE56 1095 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 EXOC2Q96KP1 924 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 C1orf74Q96LT6 269 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 KREMEN1Q96MU8 473 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 OR6C1Q96RD1 312 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 SMAD5Q99717 465 aaKnown RBP9.07□□□□□ -0.96
NUP54-211ENST00000512151 ZYG11BQ9C0D3 744 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 BRD8Q9H0E9 1235 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 LHX3Q9UBR4 397 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 ATP8A1Q9Y2Q0 1164 aa9.07□□□□□ -0.96
NUP54-211ENST00000512151 COPG1Q9Y678 874 aaKnown RBP9.07□□□□□ -0.96
NUP54-211ENST00000512151 IGSF6O95976 241 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 ERBB2P04626 1255 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 ANKRD34CP0C6C1 535 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 CCNYL3P0C7X3 344 aa9.06□□□□□ -0.96
NUP54-211ENST00000512151 EPB41P11171 864 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms