RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SCARF2Q96GP6 870 aaPredicted RBP10.38□□□□□ -0.75
DDX41-211ENST00000510171 SLC45A3Q96JT2 553 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 ZNF599Q96NL3 588 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 TEFMQ96QE5 360 aaKnown RBP10.38□□□□□ -0.75
DDX41-211ENST00000510171 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
DDX41-211ENST00000510171 SLC38A3Q99624 504 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 EFHD1Q9BUP0 239 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 GPN2Q9H9Y4 310 aaPredicted RBP10.38□□□□□ -0.75
DDX41-211ENST00000510171 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
DDX41-211ENST00000510171 PARVAQ9NVD7 372 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 TMEM9Q9P0T7 183 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 PDP2Q9P2J9 529 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 PILRAQ9UKJ1 303 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 MYO6Q9UM54 1294 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 ST14Q9Y5Y6 855 aa10.38□□□□□ -0.75
DDX41-211ENST00000510171 PSMD11O00231 422 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 RNF8O76064 485 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 PRKAR1AP10644 381 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 GP1BBP13224 206 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 LHCGRP22888 699 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 HSPA9P38646 679 aaKnown RBP10.37□□□□□ -0.75
DDX41-211ENST00000510171 GPR1P46091 355 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 HCAR3P49019 387 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 ZNF135P52742 658 aaPredicted RBP10.37□□□□□ -0.75
DDX41-211ENST00000510171 MC2RQ01718 297 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 DPTQ07507 201 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 ZNF235Q14590 738 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 PPP6R3Q5H9R7 873 aaPredicted RBP10.37□□□□□ -0.75
DDX41-211ENST00000510171 SNAP47Q5SQN1 464 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 DOK6Q6PKX4 331 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 LURAP1LQ8IV03 231 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 PSTKQ8IV42 348 aaKnown RBP10.37□□□□□ -0.75
DDX41-211ENST00000510171 BBS5Q8N3I7 341 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 AOPEPQ8N6M6 819 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 ARFGAP1Q8N6T3 406 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 BMPERQ8N8U9 685 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 OR10G6Q8NH81 332 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 APOBEC4Q8WW27 367 aaKnown RBP10.37□□□□□ -0.75
DDX41-211ENST00000510171 RTP4Q96DX8 246 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 OR2M4Q96R27 311 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 NUDCD1Q96RS6 583 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 BPIFA3Q9BQP9 254 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 ZPBPQ9BS86 351 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 SNRNP25Q9BV90 132 aaKnown RBP10.37□□□□□ -0.75
DDX41-211ENST00000510171 HSD3B7Q9H2F3 369 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 TMEM98Q9Y2Y6 226 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 PLEKHM1Q9Y4G2 1056 aa10.37□□□□□ -0.75
DDX41-211ENST00000510171 NPIPB15A6NHN6 443 aaPredicted RBP10.36□□□□□ -0.75
DDX41-211ENST00000510171 SMTNL1A8MU46 457 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 A8MU76 341 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 DUX1O43812 170 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 PRPSAP2O60256 369 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 ATP1A3P13637 1013 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 CR2P20023 1033 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 TNFAIP3P21580 790 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 MIPP30301 263 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 FASLGP48023 281 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 MC1RQ01726 317 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 ABHD18Q0P651 414 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 CDC20Q12834 499 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 LRP8Q14114 963 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 SEPT6Q14141 434 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 PTPRRQ15256 657 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 PYCR3Q53H96 274 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 ARMC12Q5T9G4 340 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 WDR74Q6RFH5 385 aaPredicted RBP10.36□□□□□ -0.75
DDX41-211ENST00000510171 CEACAM20Q6UY09 585 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 ADAMTSL4Q6UY14 1074 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 USP45Q70EL2 814 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 MARK2Q7KZI7 788 aaKnown RBP10.36□□□□□ -0.75
DDX41-211ENST00000510171 KDELC2Q7Z4H8 507 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 TECPR1Q7Z6L1 1165 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 TSPAN33Q86UF1 283 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 ZNF761Q86XN6 746 aaPredicted RBP10.36□□□□□ -0.75
DDX41-211ENST00000510171 TP53INP2Q8IXH6 220 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 UNC5BQ8IZJ1 945 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 NDUFAF2Q8N183 169 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 PGBD5Q8N414 524 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 NSMCE1Q8WV22 266 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 AP2M1Q96CW1 435 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 ABHD17AQ96GS6 310 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 PEBP4Q96S96 227 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 CTRCQ99895 268 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 SPRY4Q9C004 299 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 TRIT1Q9H3H1 467 aaKnown RBP10.36□□□□□ -0.75
DDX41-211ENST00000510171 ZWILCHQ9H900 591 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 FBXO8Q9NRD0 319 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 TAS2R14Q9NYV8 317 aa10.36□□□□□ -0.75
DDX41-211ENST00000510171 CWC15Q9P013 229 aaKnown RBP10.36□□□□□ -0.75
DDX41-211ENST00000510171 LOC101059948A0A1B0GTJ6 334 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 TMEM191CA6NGB0 347 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 TMCO5BA8MYB1 307 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 H3BRJ5 948 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 PGLSO95336 258 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 MAP3K6O95382 1288 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 PEX11BO96011 259 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 CTPS1P17812 591 aa10.35□□□□□ -0.75
DDX41-211ENST00000510171 NOP2P46087 812 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms