RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 COX14Q96I36 57 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 BTBD6Q96KE9 485 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 CSPG4P5Q96PW8 444 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 GSDMCQ9BYG8 508 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 B3GNT4Q9C0J1 378 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 HAUS4Q9H6D7 363 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 APMAPQ9HDC9 416 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 PHPT1Q9NRX4 125 aaPredicted RBP13.32□□□□□ -0.28
DDX41-210ENST00000509576 PARVAQ9NVD7 372 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 PDP2Q9P2J9 529 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 CNOT8Q9UFF9 292 aaKnown RBP13.32□□□□□ -0.28
DDX41-210ENST00000509576 CNOT6Q9ULM6 557 aaKnown RBP13.32□□□□□ -0.28
DDX41-210ENST00000509576 PRKAB1Q9Y478 270 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 USP9YO00507 2555 aaPredicted RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 ANKRD62A6NC57 917 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 A6NCN8 305 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 RHPN2P1A8MT19 583 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 STMND1H3BQB6 276 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 DAPK3O43293 454 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 CD48P09326 243 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 RARAP10276 462 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 CD82P27701 267 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 TEAD1P28347 426 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 ACTR1BP42025 376 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 ACTR1AP61163 376 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 TLE1Q04724 770 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 DPTQ07507 201 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 ILF3Q12906 894 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX41-210ENST00000509576 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 SKIDA1Q1XH10 827 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 LRRC66Q68CR7 880 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 RAET1GQ6H3X3 334 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 ATG14Q6ZNE5 492 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 MARK2Q7KZI7 788 aaKnown RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 TAAR9Q96RI9 348 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
DDX41-210ENST00000509576 CTRCQ99895 268 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 ARHGAP9Q9BRR9 750 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 SLC25A18Q9H1K4 315 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 EPN3Q9H201 632 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 PCDH18Q9HCL0 1135 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 PILRAQ9UKJ1 303 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 PHTF1Q9UMS5 762 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 MED13Q9UHV7 2174 aa13.31□□□□□ -0.28
DDX41-210ENST00000509576 LOC101059948A0A1B0GTJ6 334 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 PSMD11O00231 422 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 NKX2-8O15522 239 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 PRPSAP2O60256 369 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 DNAJC6O75061 913 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 MAP3K6O95382 1288 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 SKILP12757 684 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 GPR3P46089 330 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 ZNF235Q14590 738 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
DDX41-210ENST00000509576 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 XKR5Q6UX68 686 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 ADAMTSL4Q6UY14 1074 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 PSTKQ8IV42 348 aaKnown RBP13.3□□□□□ -0.28
DDX41-210ENST00000509576 UNC5BQ8IZJ1 945 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 SFRP1Q8N474 314 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 TEX26Q8N6G2 289 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 AOPEPQ8N6M6 819 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 OR2M4Q96R27 311 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 ZWILCHQ9H900 591 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
DDX41-210ENST00000509576 SEPT10Q9P0V9 454 aa13.3□□□□□ -0.28
DDX41-210ENST00000509576 HEMK1Q9Y5R4 338 aaPredicted RBP13.3□□□□□ -0.28
DDX41-210ENST00000509576 CLEC18AA5D8T8 446 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 EFCAB7A8K855 629 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 FADS2P1A8MWK0 482 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 K7EM74 188 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 MFSD11O43934 449 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 RAD1O60671 282 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 ATP1A1P05023 1023 aaKnown RBP13.29□□□□□ -0.28
DDX41-210ENST00000509576 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 F8A1P23610 371 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 OAS2P29728 719 aaKnown RBP13.29□□□□□ -0.28
DDX41-210ENST00000509576 PRKCIP41743 596 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 MMP13P45452 471 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 FASLGP48023 281 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 RENBPP51606 427 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 ARSEP51690 589 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 STC1P52823 247 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 POLE2P56282 527 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 DSC2Q02487 901 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 NIPAL4Q0D2K0 466 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 IGFBP7Q16270 282 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 ATP13A4Q4VNC1 1196 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 ALG1LQ6GMV1 187 aa13.29□□□□□ -0.28
DDX41-210ENST00000509576 CLEC18BQ6UXF7 455 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms