RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZNF438Q7Z4V0 828 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 HSD11B1LQ7Z5J1 315 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 JAMLQ86YT9 394 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 Q8N9G6 341 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 CCDC112Q8NEF3 446 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 EXD1Q8NHP7 514 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 CCHCR1Q8TD31 782 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 SCARF2Q96GP6 870 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 BTBD6Q96KE9 485 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 LYSMD1Q96S90 227 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 ADGRE3Q9BY15 652 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 RBM22Q9NW64 420 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 IFNKQ9P0W0 207 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 TAAR2Q9P1P5 351 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 RABGEF1Q9UJ41 708 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 ATXN7L1Q9ULK2 861 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 SUFUQ9UMX1 484 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 PCDHB11Q9Y5F2 797 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 RNF215Q9Y6U7 377 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 SCN8AQ9UQD0 1980 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 A0A1W2PNU3 283 aaPredicted RBP13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 SSU72P8A0A1W2PR75 194 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 TTC24A2A3L6 582 aaPredicted RBP13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 MFSD11O43934 449 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 FGF1P05230 155 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 LIPCP11150 499 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 SLC2A4P14672 509 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 ZFXP17010 805 aaPredicted RBP13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 SLC5A2P31639 672 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 CASP14P31944 242 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 CFHR1Q03591 330 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 TCEA2Q15560 299 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 MAP9Q49MG5 647 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 ODF2Q5BJF6 829 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 NCBP2-AS2Q69YL0 99 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 TXNRD3NBQ6F5E7 133 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 AVL9Q8NBF6 648 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 OR8K1Q8NGG5 319 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 FAF2Q96CS3 445 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 HDAC11Q96DB2 347 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 NSMCE3Q96MG7 304 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 SRPK1Q96SB4 655 aaKnown RBP13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 TDRD1Q9BXT4 1180 aaKnown RBP13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 BRD8Q9H0E9 1235 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 STN1Q9H668 368 aaKnown RBP13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 RMI1Q9H9A7 625 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 CPNE5Q9HCH3 593 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 RAD18Q9NS91 495 aa13.55□□□□□ -0.24
CCHCR1-227ENST00000508852 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 ADCY8P40145 1251 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 STC1P52823 247 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 GPLD1P80108 840 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 B4GALNT1Q00973 533 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 CTBSQ01459 385 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 PTSQ03393 145 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 MMRN1Q13201 1228 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 CLN3Q13286 438 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 BZW1Q7L1Q6 419 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 B3GNT8Q7Z7M8 397 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 ZNF605Q86T29 641 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 GALNT13Q8IUC8 556 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 RHOT2Q8IXI1 618 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 CCDC13Q8IYE1 715 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 ZSCAN1Q8NBB4 408 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 CCNYQ8ND76 341 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 OR2M4Q96R27 311 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 MAK16Q9BXY0 300 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 PCDH9Q9HC56 1237 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 VPS18Q9P253 973 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 PISDQ9UG56 409 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 NENFQ9UMX5 172 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 TTLL3Q9Y4R7 772 aa13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 ZFC3H1O60293 1989 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-227ENST00000508852 KALRNO60229 2985 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 GCN1Q92616 2671 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 AKR1B10O60218 316 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 ECEL1O95672 775 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 PDHA1P08559 390 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 CD48P09326 243 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 CTPS1P17812 591 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 ALDH4A1P30038 563 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 ACTR1BP42025 376 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 ACTR1AP61163 376 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 ZSCAN23Q3MJ62 389 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 SLC30A9Q6PML9 568 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 TSPAN33Q86UF1 283 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 NRROSQ86YC3 692 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 SLITRK4Q8IW52 837 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 PELI3Q8N2H9 469 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 OR4D9Q8NGE8 314 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 CCL4L1Q8NHW4 92 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms