RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 KRT24Q2M2I5 525 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 ANKRD54Q6NXT1 300 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 DUS1LQ6P1R4 473 aaKnown RBP5.12□□□□□ -1.59
GYPA-205ENST00000508337 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.12□□□□□ -1.59
GYPA-205ENST00000508337 RBM23Q86U06 439 aaKnown RBP5.12□□□□□ -1.59
GYPA-205ENST00000508337 GPR180Q86V85 440 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 CLEC18CQ8NCF0 446 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 TMEM116Q8NCL8 245 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 POMGNT1Q8WZA1 660 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 HDAC2Q92769 488 aaKnown RBP5.12□□□□□ -1.59
GYPA-205ENST00000508337 MOAP1Q96BY2 351 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 MTERF1Q99551 399 aaKnown RBP5.12□□□□□ -1.59
GYPA-205ENST00000508337 IL25Q9H293 177 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 SH2D4AQ9H788 454 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 MCM9Q9NXL9 1143 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 KCNS2Q9ULS6 477 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 PSAT1Q9Y617 370 aa5.12□□□□□ -1.59
GYPA-205ENST00000508337 IGHV4OR15-8A0A075B7B6 117 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 FAM237BA0A1B0GVD1 139 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 IFNL4K9M1U5 179 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 TAF4O00268 1085 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 PAGE4O60829 102 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 TMEM63AO94886 807 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 LINC00271P0C7V0 271 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 HNRNPH2P55795 449 aaKnown RBP5.11□□□□□ -1.59
GYPA-205ENST00000508337 ERVFC1-1P60608 527 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 MPP1Q00013 466 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 PDE1BQ01064 536 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 MAD2L1Q13257 205 aaPredicted RBP5.11□□□□□ -1.59
GYPA-205ENST00000508337 NAB2Q15742 525 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 ZSCAN23Q3MJ62 389 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 DCST1Q5T197 706 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 GPATCH4Q5T3I0 446 aaKnown RBP5.11□□□□□ -1.59
GYPA-205ENST00000508337 TTI2Q6NXR4 508 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 TMEM154Q6P9G4 183 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 TEX11Q8IYF3 940 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 NME8Q8N427 588 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 MAB21L3Q8N8X9 362 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 WFIKKN2Q8TEU8 576 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 DNAAF4Q8WXU2 420 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 FIG4Q92562 907 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 ARHGEF26Q96DR7 871 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 MMABQ96EY8 250 aaPredicted RBP5.11□□□□□ -1.59
GYPA-205ENST00000508337 CMKLR1Q99788 373 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 STRA6Q9BX79 667 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 ZNF112Q9UJU3 913 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 TINAGQ9UJW2 476 aa5.11□□□□□ -1.59
GYPA-205ENST00000508337 B4E171 279 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 H3BQ06 376 aaPredicted RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 SPINT2O43291 252 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 RNASEH2AO75792 299 aaKnown RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 AMD1P17707 334 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 PSMA4P25789 261 aaKnown RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 HOXC9P31274 260 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 USP8P40818 1118 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 TSPAN7P41732 249 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 AMPHP49418 695 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 TFAP4Q01664 338 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 ZNF155Q12901 538 aaPredicted RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 PDE1CQ14123 709 aaPredicted RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 HAUS3Q68CZ6 603 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 HIST2H2BCQ6DN03 193 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 HIST2H2BDQ6DRA6 164 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 TMTC3Q6ZXV5 915 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 DPPA4Q7L190 304 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 POC1AQ8NBT0 407 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 PPHLN1Q8NEY8 458 aaKnown RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 OR14L1PQ8NHC6 308 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 PPP4R1Q8TF05 950 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 CDCA5Q96FF9 252 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 MAP7D2Q96T17 732 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 RANGRFQ9HD47 186 aaPredicted RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 ACSS1Q9NUB1 689 aaPredicted RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 CWC15Q9P013 229 aaKnown RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 MTMR6Q9Y217 621 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 R3HDM2Q9Y2K5 976 aaKnown RBP5.1□□□□□ -1.59
GYPA-205ENST00000508337 LRP12Q9Y561 859 aa5.1□□□□□ -1.59
GYPA-205ENST00000508337 FAM237AA0A1B0GTK4 181 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 PPP1R3DO95685 299 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 CD4P01730 458 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 CETPP11597 493 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 UBA1P22314 1058 aaKnown RBP5.09□□□□□ -1.59
GYPA-205ENST00000508337 KCNA5P22460 613 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 DGKAP23743 735 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 ICAM3P32942 547 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 PRCPP42785 496 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 TAS2R38P59533 333 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 ZBED6P86452 979 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 ACSM2AQ08AH3 577 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 MED22Q15528 200 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 ZNF718Q3SXZ3 478 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 FRG2Q64ET8 278 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 WBP2NLQ6ICG8 309 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 CYP20A1Q6UW02 462 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 TUBA1AQ71U36 451 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 RNF113BQ8IZP6 322 aaKnown RBP5.09□□□□□ -1.59
GYPA-205ENST00000508337 PCDH20Q8N6Y1 951 aaKnown RBP5.09□□□□□ -1.59
GYPA-205ENST00000508337 SGCDQ92629 289 aa5.09□□□□□ -1.59
GYPA-205ENST00000508337 ARHGEF2Q92974 986 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms