RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 KRT9P35527 623 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 GABRB2P47870 512 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 DLX5P56178 289 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 ARL16Q0P5N6 197 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 USP41Q3LFD5 358 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 LRIF1Q5T3J3 769 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 CCDC70Q6NSX1 233 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 DPPA4Q7L190 304 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 ATG9AQ7Z3C6 839 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 SLC9B2Q86UD5 537 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 NRROSQ86YC3 692 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 PCDH20Q8N6Y1 951 aaKnown RBP3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 FIG4Q92562 907 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 TTC14Q96N46 770 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 MTERF1Q99551 399 aaKnown RBP3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 TMEM47Q9BQJ4 181 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 VPS33BQ9H267 617 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 IRAK4Q9NWZ3 460 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 ORC3Q9UBD5 711 aaPredicted RBP3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 RALYQ9UKM9 306 aaKnown RBP3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 TTC7AQ9ULT0 858 aaPredicted RBP3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 TMEM98Q9Y2Y6 226 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 KCNE2Q9Y6J6 123 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 UTYO14607 1347 aa3.41□□□□□ -1.86
CDC42SE2-210ENST00000506929 IGHV4OR15-8A0A075B7B6 117 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 H3BQ06 376 aaPredicted RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SLC16A5O15375 505 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 BUB3O43684 328 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 RFPL2O75678 378 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SEC14L2O76054 403 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAGE7O76087 117 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAGE12FP0CL80 117 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAGE12GP0CL81 117 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAGE12IP0CL82 117 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 RARGP13631 454 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 CD58P19256 250 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAS1P54826 345 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 RPL7AP62424 266 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 CDC16Q13042 620 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAGE1Q13065 139 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GAGE4Q13068 117 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 TNFAIP1Q13829 316 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 KCNT1Q5JUK3 1230 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 C6orf141Q5SZD1 244 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 GGNBP1Q5YKI7 109 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SIGIRRQ6IA17 410 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 FAM180BQ6P0A1 224 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 METTL2BQ6P1Q9 378 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 CCNI2Q6ZMN8 369 aaPredicted RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 PXKQ7Z7A4 578 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 DSG4Q86SJ6 1040 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SMIM29Q86T20 159 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 C1orf87Q8N0U7 546 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 ANKRD52Q8NB46 1076 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 POC1AQ8NBT0 407 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SLC44A1Q8WWI5 657 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 APBB2Q92870 758 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 RRNAD1Q96FB5 475 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 METTL2AQ96IZ6 378 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 MPP4Q96JB8 637 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 SMC6Q96SB8 1091 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 PCGF1Q9BSM1 259 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 STRA6Q9BX79 667 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 ITPAQ9BY32 194 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 IFIH1Q9BYX4 1025 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 PRKRIP1Q9H875 184 aaPredicted RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 FBRSL1Q9HCM7 1045 aaKnown RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 RANGRFQ9HD47 186 aaPredicted RBP3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 PADI1Q9ULC6 663 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 OR2W1Q9Y3N9 320 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 CLIC4Q9Y696 253 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 CGNL1Q0VF96 1302 aa3.4□□□□□ -1.87
CDC42SE2-210ENST00000506929 EPB41L2O43491 1005 aaKnown RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 LDB3O75112 727 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 ZNF432O94892 652 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 HOXB5P09067 269 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 CDH1P12830 882 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 DAOP14920 347 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 ZNF182P17025 639 aaPredicted RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 APOBEC1P41238 236 aaKnown RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 TMPOP42166 694 aaKnown RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 RUNX1T1Q06455 604 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 OLIG2Q13516 323 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 ZNF672Q499Z4 452 aaPredicted RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 SNX30Q5VWJ9 437 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 TMEM198Q66K66 360 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 KCTD18Q6PI47 426 aaPredicted RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 MEX3BQ6ZN04 569 aaKnown RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 NEK10Q6ZWH5 1172 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 TMTC3Q6ZXV5 915 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 USP43Q70EL4 1123 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 TUBA1AQ71U36 451 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 TBC1D1Q86TI0 1168 aaPredicted RBP3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 TMPRSS12Q86WS5 348 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 SECTM1Q8WVN6 248 aa3.39□□□□□ -1.87
CDC42SE2-210ENST00000506929 ZNF385AQ96PM9 386 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms