RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LRP8Q14114 963 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 NFATC4Q14934 902 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 ACOX1Q15067 660 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 LLGL1Q15334 1064 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 TRIM61Q5EBN2 209 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 PCID2Q5JVF3 399 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 LDLRAP1Q5SW96 308 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 DENND5AQ6IQ26 1287 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 PNCKQ6P2M8 343 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 CYS1Q717R9 158 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 FAM124AQ86V42 546 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 PARGQ86W56 976 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 FSTL5Q8N475 847 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 DNAAF3Q8N9W5 541 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 NETO1Q8TDF5 533 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 PIGKQ92643 395 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 SNF8Q96H20 258 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 MS4A14Q96JA4 679 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 TCF12Q99081 682 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 ERP44Q9BS26 406 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 DUSP23Q9BVJ7 150 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 AP1M1Q9BXS5 423 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 WDR26Q9H7D7 661 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 L2HGDHQ9H9P8 463 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 SEMA4GQ9NTN9 838 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 NLE1Q9NVX2 485 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 POLR3BQ9NW08 1133 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 WDR87Q6ZQQ6 2873 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 KNTC1P50748 2209 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 LRP4O75096 1905 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ARHGEF17Q96PE2 2063 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 FAM237BA0A1B0GVD1 139 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 FAM47DPA6NHR8 397 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 SDR42E2A6NKP2 422 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ESPNB1AK53 854 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ZNF185O15231 689 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 MMP20O60882 483 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 SPAG6O75602 509 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 URI1O94763 535 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PAK4O96013 591 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 IVLP07476 585 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 GSTA2P09210 222 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ALPIP09923 528 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 RALBP11234 206 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 SLC2A4P14672 509 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 NME1P15531 152 aaKnown RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 LHCGRP22888 699 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ADCY8P40145 1251 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 CCT8P50990 548 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ZNF140P52738 457 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 METAP1P53582 386 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ATXN3P54252 364 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 NXPH1P58417 271 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PPP2CBP62714 309 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PPP2CAP67775 309 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 BASP1P80723 227 aaKnown RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PLOD1Q02809 727 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 IHHQ14623 411 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PCSK7Q16549 785 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 WSCD2Q2TBF2 565 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 RNF187Q5TA31 235 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 RNASEH2BQ5TBB1 312 aaKnown RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 TTC27Q6P3X3 843 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 DBX2Q6ZNG2 339 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PRR23CQ6ZRP0 262 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 GALNT7Q86SF2 657 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PHYKPLQ8IUZ5 450 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PDIK1LQ8N165 341 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 TTC30BQ8N4P2 665 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 NAT8LQ8N9F0 302 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 NETO2Q8NC67 525 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 PPHLN1Q8NEY8 458 aaKnown RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 OR6C4Q8NGE1 309 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 CALML6Q8TD86 181 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 SNX19Q92543 992 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 AP2M1Q96CW1 435 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 COX14Q96I36 57 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 HIC2Q96JB3 615 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 NSMCE3Q96MG7 304 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 WDR92Q96MX6 357 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ELF4Q99607 663 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 GORASP1Q9BQQ3 440 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 FICDQ9BVA6 458 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 KIFC1Q9BW19 673 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 DDX47Q9H0S4 455 aaKnown RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 VPS37BQ9H9H4 285 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 AASDHPPTQ9NRN7 309 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 TRNAU1APQ9NX07 287 aaKnown RBP8.43□□□□□ -1.06
PDGFC-205ENST00000506880 SAMD15Q9P1V8 674 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ASIC3Q9UHC3 531 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 GPR34Q9UPC5 381 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 ANKRD6Q9Y2G4 727 aa8.43□□□□□ -1.06
PDGFC-205ENST00000506880 FRYLO94915 3013 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 FANCGO15287 622 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 SLC31A1O15431 190 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms