RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 RALGDSQ12967 914 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 NFATC3Q12968 1075 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 CA9Q16790 459 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 BOLA3Q53S33 107 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 MANEAQ5SRI9 462 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 TMEM164Q5U3C3 297 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 DPPA4Q7L190 304 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 NT5DC3Q86UY8 548 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 C17orf82Q86X59 251 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 RHOT1Q8IXI2 618 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 PLA2G15Q8NCC3 412 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 HSPH1Q92598 858 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 DPEP2Q9H4A9 486 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 AKAP7Q9P0M2 348 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 IL17BQ9UHF5 180 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 AP4E1Q9UPM8 1137 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 RNF215Q9Y6U7 377 aa11.33□□□□□ -0.6
CCHCR1-220ENST00000506831 PRAMEF33A0A0G2JMD5 474 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TRAFD1O14545 582 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 HGSO14964 777 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PRAMEF10O60809 474 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ELFN1P0C7U0 828 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 RARAP10276 462 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ITIH1P19827 911 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 CTNNA2P26232 953 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 RGRP47804 291 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PAPOLAP51003 745 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 RENBPP51606 427 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ZNF135P52742 658 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TPI1P60174 286 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PEX6Q13608 980 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 NR1D2Q14995 579 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ZNF569Q5MCW4 686 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 KCTD16Q68DU8 428 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PNCKQ6P2M8 343 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ATG14Q6ZNE5 492 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 NYAP1Q6ZVC0 841 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PRICKLE2Q7Z3G6 844 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 ZNF438Q7Z4V0 828 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 POLNQ7Z5Q5 900 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PIM3Q86V86 326 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PSTKQ8IV42 348 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 SLC35F6Q8N357 371 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TRIM58Q8NG06 486 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 KRT35Q92764 455 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 EXTL1Q92935 676 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 USP7Q93009 1102 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 SLC39A8Q9C0K1 460 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TMEM168Q9H0V1 697 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 DHX35Q9H5Z1 703 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 WDR26Q9H7D7 661 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 CYP4F12Q9HCS2 524 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 MRPL40Q9NQ50 206 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 TRNAU1APQ9NX07 287 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
CCHCR1-220ENST00000506831 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 PRSS38A1L453 326 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 C9orf172C9J069 976 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 EEF2KO00418 725 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 TERTO14746 1132 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 SUV39H1O43463 412 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 B4GAT1O43505 415 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 KRT1P04264 644 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 MYCLP1P12525 358 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 CCNB1P14635 433 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 GM2AP17900 193 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 ETV5P41161 510 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 GPR3P46089 330 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 MARCKSL1P49006 195 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 AP1S1P61966 158 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 IL10RBQ08334 325 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 SQSTM1Q13501 440 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 KRT81Q14533 505 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 TCEA2Q15560 299 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 DPYSL2Q16555 572 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 ZFYVE27Q5T4F4 411 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 TMPRSS9Q7Z410 1059 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 ZFAND4Q86XD8 727 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 PSKH2Q96QS6 385 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 LGR4Q9BXB1 951 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 TEX101Q9BY14 249 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 GSDMCQ9BYG8 508 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 GEMIN8Q9NWZ8 242 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-220ENST00000506831 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms