RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 IVLP07476 585 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 FGF3P11487 239 aaPredicted RBP11.33□□□□□ -0.6
SIL1-208ENST00000505945 MPSTP25325 297 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 TEAD1P28347 426 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 GPR3P46089 330 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 GPR1P46091 355 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 LIMK2P53671 638 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 CDH6P55285 790 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 NFKB2Q00653 900 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 KCNC4Q03721 635 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 DPTQ07507 201 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 ITKQ08881 620 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 PIGHQ14442 188 aaPredicted RBP11.33□□□□□ -0.6
SIL1-208ENST00000505945 TBR1Q16650 682 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 RALGPS1Q5JS13 557 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 XKR5Q6UX68 686 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 USP45Q70EL2 814 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
SIL1-208ENST00000505945 TRIM74Q86UV6 250 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.33□□□□□ -0.6
SIL1-208ENST00000505945 ZSCAN1Q8NBB4 408 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 SCAMP4Q969E2 229 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 PMEPA1Q969W9 287 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 AP2M1Q96CW1 435 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 TRIM11Q96F44 468 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 SCARF2Q96GP6 870 aaPredicted RBP11.33□□□□□ -0.6
SIL1-208ENST00000505945 CCDC74BQ96LY2 380 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 MCCC1Q96RQ3 725 aaPredicted RBP11.33□□□□□ -0.6
SIL1-208ENST00000505945 SEMA3CQ99985 751 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 FAM117AQ9C073 453 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 ABCG8Q9H221 673 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 CLMPQ9H6B4 373 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 NT5MQ9NPB1 228 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 PPIL1Q9Y3C6 166 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 MAST4O15021 2626 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 SDK2Q58EX2 2172 aa11.33□□□□□ -0.6
SIL1-208ENST00000505945 IGHV1OR21-1A0A087WYE8 117 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
SIL1-208ENST00000505945 GOLGA6L22H0YM25 854 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 HGSO14964 777 aaPredicted RBP11.32□□□□□ -0.6
SIL1-208ENST00000505945 FZD6O60353 706 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 WISP1O95388 367 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 ITGB6P18564 788 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 IL4RP24394 825 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 CD82P27701 267 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 ANP32AP39687 249 aaKnown RBP11.32□□□□□ -0.6
SIL1-208ENST00000505945 ACTR1BP42025 376 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 ARSDP51689 593 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 ACTR1AP61163 376 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 PTSQ03393 145 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 IHHQ14623 411 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 CLPPQ16740 277 aaPredicted RBP11.32□□□□□ -0.6
SIL1-208ENST00000505945 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 ADAMTSL4Q6UY14 1074 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 TEX26Q8N6G2 289 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 OR4D9Q8NGE8 314 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 HTR3CQ8WXA8 447 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 ART4Q93070 314 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 NKD1Q969G9 470 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 OR2M4Q96R27 311 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 TAAR9Q96RI9 348 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 AGAP2Q99490 1192 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 BPIFA3Q9BQP9 254 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 TRIM4Q9C037 500 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 B3GNT4Q9C0J1 378 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 CDH19Q9H159 772 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 STARD5Q9NSY2 213 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 KCNK4Q9NYG8 393 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 TMEM9Q9P0T7 183 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
SIL1-208ENST00000505945 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
SIL1-208ENST00000505945 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 STMND1H3BQB6 276 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 INPP4BO15327 924 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 MBD3O95983 291 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 CD48P09326 243 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 CSF2RBP32927 897 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 SERPINB6P35237 376 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 SSR1P43307 286 aaKnown RBP11.31□□□□□ -0.6
SIL1-208ENST00000505945 EPHB1P54762 984 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 SLC25A11Q02978 314 aaKnown RBP11.31□□□□□ -0.6
SIL1-208ENST00000505945 SQSTM1Q13501 440 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
SIL1-208ENST00000505945 PEX6Q13608 980 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 KRT81Q14533 505 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 NR1I3Q14994 352 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 PYCR3Q53H96 274 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 CCDC122Q5T0U0 273 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 ZNF761Q86XN6 746 aaPredicted RBP11.31□□□□□ -0.6
SIL1-208ENST00000505945 NIPA2Q8N8Q9 360 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 AGBL5Q8NDL9 886 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 COL26A1Q96A83 441 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 ANAPC7Q9UJX3 599 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms