RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 F7P08709 466 aaPredicted RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 C1QTNF9P0C862 333 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 LPOP22079 712 aaPredicted RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 HPDP32754 393 aaPredicted RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 TIE1P35590 1138 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 HNF1BP35680 557 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 CXCL12P48061 93 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 PSMD8P48556 350 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 SERPINB9P50453 376 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 ARSDP51689 593 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 LIMK1P53667 647 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 PDE1BQ01064 536 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 BMPR2Q13873 1038 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 ELAVL3Q14576 367 aaKnown RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 C9orf64Q5T6V5 341 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 EMC10Q5UCC4 262 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 ZNF470Q6ECI4 717 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 RALGAPA1Q6GYQ0 2036 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 FSTL4Q6MZW2 842 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 BRAT1Q6PJG6 821 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 UNQ6494/PRO21346Q6UXR6 183 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 PACS1Q6VY07 963 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 MICALCLQ6ZW33 695 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 CYS1Q717R9 158 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 STRA8Q7Z7C7 330 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 DSG4Q86SJ6 1040 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 TTC30BQ8N4P2 665 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 OR4K2Q8NGD2 314 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 STYXQ8WUJ0 223 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 EZH1Q92800 747 aaPredicted RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 PEX13Q92968 403 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 HDAC10Q969S8 669 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 TLCD1Q96CP7 247 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 LRIG1Q96JA1 1093 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 SRPK1Q96SB4 655 aaKnown RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 AGAP2Q99490 1192 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 CPNE1Q99829 537 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 SELENOSQ9BQE4 189 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 CHRDQ9H2X0 955 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 TRABDQ9H4I3 376 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 NLE1Q9NVX2 485 aaPredicted RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 NSMCE4AQ9NXX6 385 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 SUN2Q9UH99 717 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 HCN2Q9UL51 889 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 RIMKLBQ9ULI2 386 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 FNDC3AQ9Y2H6 1198 aaKnown RBP9.35□□□□□ -0.91
TPM3-218ENST00000505010 PSAT1Q9Y617 370 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 ZFYVE26Q68DK2 2539 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 PLXNB3Q9ULL4 1909 aa9.35□□□□□ -0.91
TPM3-218ENST00000505010 A0A0U1RQS6 177 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 CCDC162PA2VCL2 907 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 OR51F1A6NGY5 319 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 TRIM49D1C9J1S8 452 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 K7EQS6 105 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 TM4SF5O14894 197 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 NPC1O15118 1278 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 SLC7A4O43246 635 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 KRT38O76015 456 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 IL1BP01584 269 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 CYP2A6P11509 494 aaPredicted RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 HNRNPLP14866 589 aaKnown RBP eCLIP9.34□□□□□ -0.91
TPM3-218ENST00000505010 NR1D1P20393 614 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 DRD1P21728 446 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 NFKBIAP25963 317 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ITGB7P26010 798 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ARNTP27540 789 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 GP5P40197 560 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 SLC1A2P43004 574 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ABCG1P45844 678 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ARCN1P48444 511 aaKnown RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 POLR2LP62875 67 aaKnown RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 MPP1Q00013 466 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ACVR1Q04771 509 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 GRSF1Q12849 480 aaKnown RBP eCLIP9.34□□□□□ -0.91
TPM3-218ENST00000505010 RASA2Q15283 850 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 C2orf27AQ580R0 203 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ZNF805Q5CZA5 627 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 TMEM196Q5HYL7 178 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 TEDDM1Q5T9Z0 273 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 LGSNQ5TDP6 509 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 LRRC66Q68CR7 880 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 NEPROQ6NW34 567 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 AFTPHQ6ULP2 937 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 PARS2Q7L3T8 475 aaKnown RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 PTAR1Q7Z6K3 402 aaPredicted RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 TSPAN33Q86UF1 283 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 CACUL1Q86Y37 369 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 SRRM1Q8IYB3 904 aaKnown RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 KDF1Q8NAX2 398 aaPredicted RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 GABPB2Q8TAK5 448 aaPredicted RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 FAM76AQ8TAV0 307 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 PIP4K2CQ8TBX8 421 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ATXN7L3BQ96GX2 97 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 MSANTD3Q96H12 275 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms