RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SFRP1Q8N474 314 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
LSM6-204ENST00000504181 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 NT5C1BQ96P26 610 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 NCOA6Q14686 2063 aaPredicted RBP12.45□□□□□ -0.42
LSM6-204ENST00000504181 A8MX80 341 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 BUB1O43683 1085 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 CUTAO60888 179 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
LSM6-204ENST00000504181 FGF5P12034 268 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 LPOP22079 712 aaPredicted RBP12.44□□□□□ -0.42
LSM6-204ENST00000504181 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 ACOX1Q15067 660 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 LYPLAL1Q5VWZ2 237 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 DOK6Q6PKX4 331 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 BNC2Q6ZN30 1099 aaPredicted RBP12.44□□□□□ -0.42
LSM6-204ENST00000504181 PPP1R3BQ86XI6 285 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 ZNF354CQ86Y25 554 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 PLXDC1Q8IUK5 500 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 ADAMTS17Q8TE56 1095 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 HDAC11Q96DB2 347 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
LSM6-204ENST00000504181 C9orf72Q96LT7 481 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 CPXM1Q96SM3 734 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 SUV39H2Q9H5I1 410 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
LSM6-204ENST00000504181 C5AR2Q9P296 337 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
LSM6-204ENST00000504181 PCDHGA10Q9Y5H3 936 aa12.44□□□□□ -0.42
LSM6-204ENST00000504181 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
LSM6-204ENST00000504181 STSP08842 583 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 ART1P52961 327 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 EPHA4P54764 986 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 LLGL1Q15334 1064 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 ZNF630Q2M218 657 aaPredicted RBP12.43□□□□□ -0.42
LSM6-204ENST00000504181 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.43□□□□□ -0.42
LSM6-204ENST00000504181 ZCWPW2Q504Y3 356 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 VWA5B1Q5TIE3 1220 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 RRAGAQ7L523 313 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 CUZD1Q86UP6 607 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 HCAR2Q8TDS4 363 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 OR2M4Q96R27 311 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 NPY6RQ99463 290 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 TEX101Q9BY14 249 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 FLNAP21333 2647 aaKnown RBP12.43□□□□□ -0.42
LSM6-204ENST00000504181 CNTRLQ7Z7A1 2325 aa12.43□□□□□ -0.42
LSM6-204ENST00000504181 CFAP69A5D8W1 941 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 GOLGA6CA6NDK9 693 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 GOLGA6BA6NDN3 693 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 PPP1R3GB7ZBB8 358 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 MED7O43513 233 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 C9P02748 559 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 IVLP07476 585 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 GOLGA6DP0CG33 693 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 KRT5P13647 590 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 CDK3Q00526 305 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 FAM69BQ5VUD6 431 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 OLFML1Q6UWY5 402 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 ARHGEF19Q8IW93 802 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 NUS1Q96E22 293 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 TGM7Q96PF1 710 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 TBCBQ99426 244 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 MAGEH1Q9H213 219 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 METTL14Q9HCE5 456 aaKnown RBP12.42□□□□□ -0.42
LSM6-204ENST00000504181 SARS2Q9NP81 518 aaKnown RBP12.42□□□□□ -0.42
LSM6-204ENST00000504181 PPP4R2Q9NY27 417 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 GOLGA6AQ9NYA3 693 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 LHX3Q9UBR4 397 aa12.42□□□□□ -0.42
LSM6-204ENST00000504181 NSD1Q96L73 2696 aaPredicted RBP12.42□□□□□ -0.42
LSM6-204ENST00000504181 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
LSM6-204ENST00000504181 CETN3O15182 167 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 KDELR3O43731 214 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 RASSF9O75901 435 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 EDN3P14138 238 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 MEA1Q16626 185 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 ACBD5Q5T8D3 534 aaPredicted RBP12.41□□□□□ -0.42
LSM6-204ENST00000504181 TMCO4Q5TGY1 634 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 PWWP2BQ6NUJ5 590 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
LSM6-204ENST00000504181 C11orf57Q6ZUT1 292 aaPredicted RBP12.41□□□□□ -0.42
LSM6-204ENST00000504181 MED25Q71SY5 747 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 MARK2Q7KZI7 788 aaKnown RBP12.41□□□□□ -0.42
LSM6-204ENST00000504181 SLC26A9Q7LBE3 791 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 PHLDB2Q86SQ0 1253 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 DNAAF5Q86Y56 855 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 CAMK1DQ8IU85 385 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 PASD1Q8IV76 773 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 TMEM102Q8N9M5 508 aaPredicted RBP12.41□□□□□ -0.42
LSM6-204ENST00000504181 GRHL3Q8TE85 626 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 FNIP1Q8TF40 1166 aa12.41□□□□□ -0.42
LSM6-204ENST00000504181 SH3KBP1Q96B97 665 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms