RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KRT77Q7Z794 578 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 GSTCDQ8NEC7 633 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 OR2T12Q8NG77 320 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 MCCC1Q96RQ3 725 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 PSMD13Q9UNM6 376 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 TCRBV7S2A1N4TA0A589 114 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 AP3D1O14617 1153 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 BMP7P18075 431 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 GLUD2P49448 558 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 TAF13Q15543 124 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 MPPE1Q53F39 396 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 CFAP52Q8N1V2 620 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 OR4K2Q8NGD2 314 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 FAXDC2Q96IV6 333 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 S100A13Q99584 98 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 GMIPQ9P107 970 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 NFKBIL1Q9UBC1 381 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 SAMD4AQ9UPU9 718 aaKnown RBP16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 OR10H3O60404 316 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 SEC24AO95486 1093 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 ZNF24P17028 368 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 NOGQ13253 232 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 ITGA7Q13683 1181 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC1A5Q15758 541 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 EML3Q32P44 896 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 CERS6Q6ZMG9 384 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 STYXQ8WUJ0 223 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 TEFMQ96QE5 360 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 TTYH3Q9C0H2 523 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 WDR55Q9H6Y2 383 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 EGFL7Q9UHF1 273 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 LGALS13Q9UHV8 139 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 OR10H1Q9Y4A9 318 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 GLYATL1P3A0A0U1RQE8 302 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 LRATO95237 230 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 PRG2P13727 222 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 HNF4AP41235 474 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC5A3P53794 718 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 HIPK1Q86Z02 1210 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 ADCY4Q8NFM4 1077 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 RHOBTB2Q9BYZ6 727 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 MSRAQ9UJ68 235 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 A0A1W2PQ67 120 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 ISM1B1AKI9 464 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 SEMA5AQ13591 1074 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 DLG2Q15700 870 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 ZSWIM7Q19AV6 140 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 CAPN13Q6MZZ7 669 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 RAVER1Q8IY67 606 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 CPSF7Q8N684 471 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 OR4A15Q8NGL6 344 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 FERD3LQ96RJ6 166 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 HNRNPABQ99729 332 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 NMUR2Q9GZQ4 415 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 RSL24D1Q9UHA3 163 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 GNPDA1P46926 289 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 CHSY3Q70JA7 882 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 SMYD1Q8NB12 490 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 DQX1Q8TE96 717 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 CHRAC1Q9NRG0 131 aa16.5■□□□□ 0.23
PCDHA1-203ENST00000504120 GLUD1P00367 558 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 CCNYL3P0C7X3 344 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 L1CAMP32004 1257 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 CLK3P49761 638 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 LIMK2P53671 638 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ZYG11AQ6WRX3 759 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ZHX1-C8orf76Q96EF9 292 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 RACGAP1Q9H0H5 632 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 MUC13Q9H3R2 512 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 NT5C1B-RDH14C9J2C7 533 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 FKTNO75072 461 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ERAL1O75616 437 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 FAM155BO75949 473 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 CXCL14O95715 111 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ALG11Q2TAA5 492 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 BEND7Q8N7W2 519 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 KCTD21Q4G0X4 260 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 CPTPQ5TA50 214 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 RNF44Q7L0R7 432 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 KRT74Q7RTS7 529 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 TDRPQ86YL5 185 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 KBTBD2Q8IY47 623 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ARHGEF4Q9NR80 690 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 CFAP97Q9P2B7 532 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 RAI2Q9Y5P3 530 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 AK5Q9Y6K8 562 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ZNF780BQ9Y6R6 833 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 G3V2T6 193 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 NDUFS2O75306 463 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 C1RP00736 705 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 TACR2P21452 398 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 CACNG1Q06432 222 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 LACTB2Q53H82 288 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 GK5Q6ZS86 529 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 ACBD6Q9BR61 282 aa16.49■□□□□ 0.23
PCDHA1-203ENST00000504120 TDRD1Q9BXT4 1180 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms