RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PPP2CBP62714 309 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 PPP2CAP67775 309 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 SLC29A2Q14542 456 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 UAP1Q16222 522 aaPredicted RBP20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 TMEM259Q4ZIN3 620 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 ZDHHC20Q5W0Z9 365 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 FBXO38Q6PIJ6 1188 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 HORMAD1Q86X24 394 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 SCAMP4Q969E2 229 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 DTD2Q96FN9 168 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 GPR174Q9BXC1 333 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 FAM83DQ9H4H8 585 aa20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 C20orf96Q9NUD7 363 aaPredicted RBP20.34■□□□□ 0.85
CDC42SE2-206ENST00000503291 SCN8AQ9UQD0 1980 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 GOLGA8KD6RF30 607 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 GOLGA8TH3BQL2 631 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 PAK4O96013 591 aaPredicted RBP20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 HSD17B3P37058 310 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 SPAM1P38567 509 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 XIAPP98170 497 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 CSTF1Q05048 431 aaKnown RBP20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 PEX6Q13608 980 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 USP39Q53GS9 565 aaKnown RBP20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 ALS2CLQ60I27 953 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 FAM151BQ6UXP7 276 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 CYP2U1Q7Z449 544 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 NRSN1Q8IZ57 195 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 MREGQ8N565 214 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 UHMK1Q8TAS1 419 aaKnown RBP20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 KLK6Q92876 244 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 CERS2Q96G23 380 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 PLEKHG4BQ96PX9 1271 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 C1QTNF2Q9BXJ5 285 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 ARFGAP3Q9NP61 516 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 C11orf16Q9NQ32 467 aa20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 PPANQ9NQ55 473 aaKnown RBP20.33■□□□□ 0.85
CDC42SE2-206ENST00000503291 OR51F1A6NGY5 319 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 GOT2P00505 430 aaKnown RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 ERVK-10P10266 1014 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 MAT2AP31153 395 aaKnown RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 MC4RP32245 332 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 PHBP35232 272 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 FNTBP49356 437 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 PTPN5P54829 565 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 SGCGQ13326 291 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 FGL2Q14314 439 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 ZNF284Q2VY69 593 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 CYS1Q717R9 158 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 PTAR1Q7Z6K3 402 aaPredicted RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 FBF1Q8TES7 1133 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 SLC17A9Q9BYT1 436 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 CDH19Q9H159 772 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 ABCG8Q9H221 673 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 RAD18Q9NS91 495 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 APPL1Q9UKG1 709 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 DOCK9Q9BZ29 2069 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 GLYATL1P3A0A0U1RQE8 302 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 GAPDHSO14556 408 aaPredicted RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 DCDC1P59894 354 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 FRG1Q14331 258 aaKnown RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 HSP90AA5PQ58FG0 334 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 TRIM69Q86WT6 500 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 OR4L1Q8NH43 312 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 AP2M1Q96CW1 435 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 NUS1Q96E22 293 aa20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 RIOK2Q9BVS4 552 aaKnown RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 C6orf106Q9H6K1 298 aaPredicted RBP20.32■□□□□ 0.84
CDC42SE2-206ENST00000503291 PIAS1O75925 651 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 SRP72O76094 671 aaKnown RBP20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 AGERQ15109 404 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 PDPK2PQ6A1A2 396 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 KCNMB4Q86W47 210 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 NFKBIL1Q9UBC1 381 aaPredicted RBP20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 MBD1Q9UIS9 605 aaPredicted RBP20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 RABGEF1Q9UJ41 708 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 C10orf142B7Z368 130 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 PRAMEF1O95521 474 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 THOC5Q13769 683 aaKnown RBP20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 CHRNA6Q15825 494 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 SPDYCQ5MJ68 293 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 HENMT1Q5T8I9 393 aaKnown RBP20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 NEPROQ6NW34 567 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 AFTPHQ6ULP2 937 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 SGSM3Q96HU1 749 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 SPACA7Q96KW9 195 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 FUT8Q9BYC5 575 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 FBXO4Q9UKT5 387 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 SLC30A1Q9Y6M5 507 aa20.31■□□□□ 0.84
CDC42SE2-206ENST00000503291 A0A087WUV0 522 aaPredicted RBP20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 SLC31A1O15431 190 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 NDUFS2O75306 463 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 C1QAP02745 245 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 ABHD2P08910 425 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 STX2P32856 288 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 MGAT5Q09328 741 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 KIAA0895LQ68EN5 471 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 ZNF765Q7L2R6 523 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 ZNF398Q8TD17 642 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 AGAP2Q99490 1192 aa20.3■□□□□ 0.84
CDC42SE2-206ENST00000503291 SPATA16Q9BXB7 569 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms