RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 Q6ZVL8 140 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 CCDC25Q86WR0 208 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 PALM2Q8IXS6 379 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 FAM160A2Q8N612 972 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 CALML6Q8TD86 181 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 BIRC7Q96CA5 298 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 LOXL4Q96JB6 756 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 HSPA12BQ96MM6 686 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 CHRAC1Q9NRG0 131 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 TREX1Q9NSU2 369 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 SLC30A1Q9Y6M5 507 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 RPS6KL1Q9Y6S9 549 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 ZNF318Q5VUA4 2279 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 PAK4O96013 591 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 BPIP17213 487 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ECHS1P30084 290 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 PHBP35232 272 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ELK3P41970 407 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 MAGEA4P43358 317 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 SIM2Q14190 667 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 TRADDQ15628 312 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 PLK5Q496M5 336 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ANKRD20A4Q4UJ75 823 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 HENMT1Q5T8I9 393 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 LYPLAL1Q5VWZ2 237 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 LYSMD4Q5XG99 296 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 CCNI2Q6ZMN8 369 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 IQCHQ86VS3 1027 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 DCP2Q8IU60 420 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 CNPY4Q8N129 248 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 MPP5Q8N3R9 675 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 TP53I13Q8NBR0 393 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 FBXO36Q8NEA4 188 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 HEXDCQ8WVB3 486 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 DNASE2BQ8WZ79 361 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 SNX19Q92543 992 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ZNF669Q96BR6 464 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 CDKN2AIPNLQ96HQ2 116 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 DNAJC1Q96KC8 554 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 SMIM14Q96QK8 99 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ABCG8Q9H221 673 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 SMOXQ9NWM0 555 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 RAB21Q9UL25 225 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 CHMP2BQ9UQN3 213 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 FAM169AQ9Y6X4 670 aa17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ZNF106Q9H2Y7 1883 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-215ENST00000498160 ERLIN1O75477 346 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 HOXC4P09017 264 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 GNSP15586 552 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 GM2AP17900 193 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 BCKDHBP21953 392 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 MAT2AP31153 395 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 GPR1P46091 355 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 YPEL5P62699 121 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 RACK1P63244 317 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 CRADDP78560 199 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 SEMG2Q02383 582 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 CACNG1Q06432 222 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 STAT4Q14765 748 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 LONRF1Q17RB8 773 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 MSS51Q4VC12 460 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 STEAP4Q687X5 459 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 RAET1GQ6H3X3 334 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 EMBQ6PCB8 327 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 CERS6Q6ZMG9 384 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 CYS1Q717R9 158 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 TRMT10CQ7L0Y3 403 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 SNX20Q7Z614 316 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 MYRIPQ8NFW9 859 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 OR13C4Q8NGS5 318 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 OR13J1Q8NGT2 312 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 GSDMBQ8TAX9 411 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 CENPTQ96BT3 561 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 EID2BQ96D98 161 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 VPS35Q96QK1 796 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 SPATA16Q9BXB7 569 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 BPIFA1Q9NP55 256 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 INVSQ9Y283 1065 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 VPS9D1Q9Y2B5 631 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 COQ6Q9Y2Z9 468 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 SCN8AQ9UQD0 1980 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 MUC3AQ02505 3323 aa17.49■□□□□ 0.39
CTDSP1-215ENST00000498160 PLXNA2O75051 1894 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 A6NNZ2 444 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 F8W8V4 182 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 SLC31A1O15431 190 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 HRO43593 1189 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 SRP72O76094 671 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 PRAMEF1O95521 474 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 KELP23276 732 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 STX2P32856 288 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 RABIFP47224 123 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 CRYMQ14894 314 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 PTPRRQ15256 657 aa17.48■□□□□ 0.39
CTDSP1-215ENST00000498160 MRNIPQ6NTE8 343 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms