RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZYG11AQ6WRX3 759 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 DPY19L3Q6ZPD9 716 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 KIAA0907Q7Z7F0 614 aaPredicted RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PIM3Q86V86 326 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 ZSWIM9Q86XI8 627 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 C10orf107Q8IVU9 208 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 YAF2Q8IY57 180 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 STK40Q8N2I9 435 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PPP4R1Q8TF05 950 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 SORCS1Q8WY21 1168 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 LPGAT1Q92604 370 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 RMDN2Q96LZ7 410 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 C7orf26Q96N11 449 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 LRRC3BQ96PB8 259 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 OMDQ99983 421 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 AARSD1Q9BTE6 412 aaKnown RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 TRIM55Q9BYV6 548 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 EBF3Q9H4W6 596 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 ZFYVE1Q9HBF4 777 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 POPDC3Q9HBV1 291 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 MAGEE1Q9HCI5 957 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 GPAMQ9HCL2 828 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 ABCF3Q9NUQ8 709 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 THG1LQ9NWX6 298 aaKnown RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 IL17CQ9P0M4 197 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 CDH7Q9ULB5 785 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 CRYL1Q9Y2S2 319 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 SLC30A1Q9Y6M5 507 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 A0A0U1RQS6 177 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 A0A1W2PQ67 120 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TMEM114B3SHH9 223 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 WASH3PC4AMC7 463 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TBX10O75333 385 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 DCTN3O75935 186 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 SRP72O76094 671 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 RHOBTB1O94844 696 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 POP4O95707 220 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ATP5BP06576 529 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 RALBP11234 206 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CYP2A6P11509 494 aaPredicted RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CPA3P15088 417 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ZNF37AP17032 561 aaPredicted RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 NFKBIAP25963 317 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 HMGCLP35914 325 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 SPAM1P38567 509 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CDKN2DP55273 166 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 OCRLQ01968 901 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CACNG1Q06432 222 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ASPHQ12797 758 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 STX3Q13277 289 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 PEX6Q13608 980 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ITGA9Q13797 1035 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 GRM2Q14416 872 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 EIF4HQ15056 248 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 PTPRRQ15256 657 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 FAM83EQ2M2I3 478 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 MYLK3Q32MK0 819 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 FNDC3BQ53EP0 1204 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 LRRC73Q5JTD7 316 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 AGAP9Q5VTM2 703 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 LIPMQ5VYY2 423 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 LRRC66Q68CR7 880 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TMEM215Q68D42 235 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CES5AQ6NT32 575 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 SYCE2Q6PIF2 218 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 C6orf89Q6UWU4 347 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 VITQ6UXI7 678 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TMEM184AQ6ZMB5 413 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TRPM8Q7Z2W7 1104 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 PACS2Q86VP3 889 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CRLF3Q8IUI8 442 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ETFBKMTQ8IXQ9 262 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TNS4Q8IZW8 715 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 PNPLA1Q8N8W4 532 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CHST14Q8NCH0 376 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ZNF398Q8TD17 642 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 MYLIPQ8WY64 445 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 EXT2Q93063 718 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 PBXIP1Q96AQ6 731 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ECHDC3Q96DC8 303 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 MRGPRX3Q96LB0 322 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ZNF641Q96N77 438 aaPredicted RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 LYSMD1Q96S90 227 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TCF12Q99081 682 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 KXD1Q9BQD3 176 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 OSBPL1AQ9BXW6 950 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CPEB1Q9BZB8 566 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 UNKQ9C0B0 810 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 MRPL46Q9H2W6 279 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 SUV39H2Q9H5I1 410 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 TRPV4Q9HBA0 871 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 ZFP14Q9HCL3 533 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 HPS4Q9NQG7 708 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CPSF2Q9P2I0 782 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 IL36AQ9UHA7 158 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 CRLS1Q9UJA2 301 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 DCTN4Q9UJW0 460 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 SLC27A6Q9Y2P4 619 aa8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 RRP15Q9Y3B9 282 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-212ENST00000498048 USH1CQ9Y6N9 552 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms