RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 HOXB2P14652 356 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 NAGAP17050 411 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 MAOAP21397 527 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 NRIP1P48552 1158 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 CLCN3P51790 818 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 PMS2P54278 862 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 TAS2R40P59535 323 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 IFI35P80217 286 aaPredicted RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 CKAP5Q14008 2032 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 C2orf68Q2NKX9 166 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 C15orf59Q2T9L4 293 aaPredicted RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 ZNF284Q2VY69 593 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 FSCBQ5H9T9 825 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 SIGIRRQ6IA17 410 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 NAA16Q6N069 864 aaPredicted RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 KRBA2Q6ZNG9 492 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 CFAP77Q6ZQR2 320 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 Q6ZTK2 550 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 MTSS1LQ765P7 747 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 DPPA4Q7L190 304 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 SHFQ7M4L6 423 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 ZNF367Q7RTV3 350 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 ADGRA1Q86SQ6 560 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 SAMD14Q8IZD0 417 aaPredicted RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 ARRDC2Q8TBH0 407 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 GPT2Q8TD30 523 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 ASB5Q8WWX0 329 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 PRPF31Q8WWY3 499 aaKnown RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 IGSF8Q969P0 613 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 ERGIC1Q969X5 290 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 ACOX2Q99424 681 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 MRPL1Q9BYD6 325 aaKnown RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 CLK4Q9HAZ1 481 aaKnown RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 PLAC1Q9HBJ0 212 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 SETD4Q9NVD3 440 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 COPG2Q9UBF2 871 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 SEC63Q9UGP8 760 aaKnown RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 FBXW11Q9UKB1 542 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 EXO1Q9UQ84 846 aaKnown RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 R3HDM2Q9Y2K5 976 aaKnown RBP4.08□□□□□ -1.76
SMC4-225ENST00000497203 CMAHPQ9Y471 501 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 RPS6KL1Q9Y6S9 549 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 LRRC72A6NJI9 287 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 VCYO14598 125 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 OGG1O15527 345 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 SPRY3O43610 288 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 MITFO75030 526 aaPredicted RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 ERAL1O75616 437 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 ALPLP05186 524 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 SNHG28P0DPA3 235 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 IL11P20809 199 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 UBA1P22314 1058 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 RPL3P39023 403 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 THPOP40225 353 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 RRP1P56182 461 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 MRPS5P82675 430 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 MYBPC2Q14324 1141 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 MMEL1Q495T6 779 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 DAB2IPQ5VWQ8 1189 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 SLC30A6Q6NXT4 461 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 ZNF549Q6P9A3 640 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 DLK2Q6UY11 383 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 Q6ZSV7 163 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 CTU1Q7Z7A3 348 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 TSPAN33Q86UF1 283 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 ARID3BQ8IVW6 561 aaPredicted RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 MCEMP1Q8IX19 187 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 DSELQ8IZU8 1212 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 SPATA6LQ8N4H0 392 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 MIGA1Q8NAN2 632 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 LRFN5Q96NI6 719 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 NUDCD1Q96RS6 583 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 CENPOQ9BU64 300 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 OSGEPL1Q9H4B0 414 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 ESRP2Q9H6T0 727 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 MAGIXQ9H6Y5 334 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 PDE7BQ9NP56 450 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 LTB4R2Q9NPC1 389 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 SLC35C2Q9NQQ7 365 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 PSD3Q9NYI0 1048 aa4.07□□□□□ -1.76
SMC4-225ENST00000497203 MARCH4Q9P2E8 410 aaPredicted RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 CPSF2Q9P2I0 782 aaKnown RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 TTC7AQ9ULT0 858 aaPredicted RBP4.07□□□□□ -1.76
SMC4-225ENST00000497203 KANSL1LA0AUZ9 987 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 OR2A25A4D2G3 310 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 GLOD5A6NK44 160 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 A8MV72 311 aaPredicted RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 I6L893 689 aaPredicted RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 SH2B2O14492 632 aaPredicted RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 ENTPD3O75355 529 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 SOX30O94993 753 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 VNN2O95498 520 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 FTCDO95954 541 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 DNTTP04053 509 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 RRM1P23921 792 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 HNRNPH1P31943 449 aaKnown RBP4.06□□□□□ -1.76
SMC4-225ENST00000497203 RFX2P48378 723 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 HTR6P50406 440 aa4.06□□□□□ -1.76
SMC4-225ENST00000497203 NUDT6P53370 316 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms