RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 C2orf15Q8WU43 125 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 RAD54LQ92698 747 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 SCAMP4Q969E2 229 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 NEIL1Q96FI4 390 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 BICD1Q96G01 975 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 AJUBAQ96IF1 538 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 GCNAQ96QF7 691 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TWNKQ96RR1 684 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TSPAN18Q96SJ8 248 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 PLIN2Q99541 437 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 BARD1Q99728 777 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 MESP1Q9BRJ9 268 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TCHPQ9BT92 498 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 MSTO1Q9BUK6 570 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 CPEB1Q9BZB8 566 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 TP63Q9H3D4 680 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 ST6GALNAC4Q9H4F1 302 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 EBF3Q9H4W6 596 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TMEM206Q9H813 350 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 PARVGQ9HBI0 331 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 SMYD2Q9NRG4 433 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TMEM30AQ9NV96 361 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 FAM30AQ9NZY2 134 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 GCNT4Q9P109 453 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 LARSQ9P2J5 1176 aaKnown RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 SIX4Q9UIU6 781 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 NME7Q9Y5B8 376 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 WNT6Q9Y6F9 365 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 SPG11Q96JI7 2443 aa4.45□□□□□ -1.7
VPS52-222ENST00000495981 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
VPS52-222ENST00000495981 OTOGQ6ZRI0 2925 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 SCO2A0A1W2PP80 73 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 FRMD3A2A2Y4 597 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 OR2W5A6NFC9 320 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 H0YCG3 227 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 M0QYG6 137 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 PLK4O00444 970 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 DNPH1O43598 174 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 RASSF9O75901 435 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 USP1O94782 785 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 KIF20AO95235 890 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 APBB3O95704 486 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 TK1P04183 234 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 CFIP05156 583 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 GP1BBP13224 206 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ACAT1P24752 427 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 DDX6P26196 483 aaKnown RBP eCLIP4.44□□□□□ -1.7
VPS52-222ENST00000495981 ATICP31939 592 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 CSF2RBP32927 897 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 KRT9P35527 623 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 OPRD1P41143 372 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 LIMS1P48059 325 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 TAF6P49848 677 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MEOX1P50221 254 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 DGKEP52429 567 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 BPIFB4P59827 614 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 PRKG2Q13237 762 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MRPL49Q13405 166 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 RUNX3Q13761 415 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 SLC29A2Q14542 456 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 DMC1Q14565 340 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 VEPH1Q14D04 833 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 KARSQ15046 597 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 PDGFRLQ15198 375 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ZRSR1Q15695 479 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 CFAP221Q4G0U5 840 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 GAGE13Q4V321 117 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 SDHAF4Q5VUM1 108 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ERICH6BQ5W0A0 696 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 TXNDC8Q6A555 127 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 KLHL17Q6TDP4 642 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 BBS12Q6ZW61 710 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 NEK10Q6ZWH5 1172 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 SYT13Q7L8C5 426 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MON1AQ86VX9 555 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 GAS2L3Q86XJ1 694 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 SYT12Q8IV01 421 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 CD302Q8IX05 232 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MINDY1Q8N5J2 469 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MAB21L3Q8N8X9 362 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ANKRD53Q8N9V6 530 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 FAM184AQ8NB25 1140 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 CCDC150Q8NCX0 1101 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MDGA1Q8NFP4 955 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 RPLP0P6Q8NHW5 317 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 OLIG1Q8TAK6 271 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MZB1Q8WU39 189 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ZBTB8AQ96BR9 441 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 HVCN1Q96D96 273 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 CNOT6LQ96LI5 555 aaKnown RBP4.44□□□□□ -1.7
VPS52-222ENST00000495981 AK8Q96MA6 479 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 ZNF560Q96MR9 790 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 PWWP2AQ96N64 755 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 KLHL32Q96NJ5 620 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MED15Q96RN5 788 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 MTMR12Q9C0I1 747 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 OR10A2Q9H208 303 aa4.44□□□□□ -1.7
VPS52-222ENST00000495981 SLC6A15Q9H2J7 730 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms