RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 QPCTQ16769 361 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 MYLK3Q32MK0 819 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 CARD16Q5EG05 197 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 LY6G5CQ5SRR4 150 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 ASTLQ6HA08 431 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 TPRG1Q6ZUI0 275 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 FAM47EQ6ZV65 393 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 USP45Q70EL2 814 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 WDR75Q8IWA0 830 aaKnown RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 SIX5Q8N196 739 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 FBXL6Q8N531 539 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 OR4K2Q8NGD2 314 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 WFDC5Q8TCV5 224 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 TBATAQ96M53 351 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 C7orf26Q96N11 449 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 MCMBPQ9BTE3 642 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 TUBB6Q9BUF5 446 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 ACTR5Q9H9F9 607 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 SYTL2Q9HCH5 934 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 HEBP1Q9NRV9 189 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 RAD18Q9NS91 495 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 GTSE1Q9NYZ3 720 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 SIRPGQ9P1W8 387 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 DEC1Q9P2X7 70 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 COPG2Q9UBF2 871 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 RUVBL2Q9Y230 463 aaKnown RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 SLC27A6Q9Y2P4 619 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 VWA7Q9Y334 891 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 PCDHB9Q9Y5E1 797 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 ARL5AQ9Y689 179 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 WNT6Q9Y6F9 365 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 CCT8L1PA6NM43 557 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TMEM114B3SHH9 223 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 F8W8V4 182 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SCAMP3O14828 347 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 HTRA2O43464 458 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 FZD6O60353 706 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TRIM13O60858 407 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 ATG13O75143 517 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 ATP5HO75947 161 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 HAUS5O94927 633 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 PRLP01236 227 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 PROCP04070 461 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 APODP05090 189 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SERPINE1P05121 402 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 LTA4HP09960 611 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 RALBP11234 206 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 CYP2A6P11509 494 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SRCP12931 536 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 BGNP21810 368 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 ARNTP27540 789 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 CD70P32970 193 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 HMGCLP35914 325 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 GRIA2P42262 883 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 ABL2P42684 1182 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TNFRSF4P43489 277 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 RGRP47804 291 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 DGKGP49619 791 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 ZNF140P52738 457 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 NAA20P61599 178 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 MPP1Q00013 466 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TRAF2Q12933 501 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 EIF4HQ15056 248 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TMEM196Q5HYL7 178 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 MBLAC2Q68D91 279 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 C22orf39Q6P5X5 142 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TRPM8Q7Z2W7 1104 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TRMT11Q7Z4G4 463 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 KIAA0907Q7Z7F0 614 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SLC41A1Q8IVJ1 513 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 DENND6AQ8IWF6 608 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 PJA1Q8NG27 643 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 RIN3Q8TB24 985 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 HCAR2Q8TDS4 363 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 DNAJC1Q96KC8 554 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 P2RY13Q9BPV8 354 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 MRPL57Q9BQC6 102 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 OSBPL1AQ9BXW6 950 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TM6SF2Q9BZW4 377 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 IRF2BPLQ9H1B7 796 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 LINC00597Q9H2U6 94 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 STN1Q9H668 368 aaKnown RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TBC1D17Q9HA65 648 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 GPAMQ9HCL2 828 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 LTB4R2Q9NPC1 389 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 FBXO6Q9NRD1 293 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 TAS2R13Q9NYV9 303 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SLC17A6Q9P2U8 582 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 HECAQ9UBI9 543 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 EVLQ9UI08 416 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-214ENST00000495485 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 PLA2G4CQ9UP65 541 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SIT1Q9Y3P8 196 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms