RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	CRTC1	Q6UUV9	634 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	DPPA4	Q7L190	304 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	KCTD6	Q8NC69	237 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	LRRN4	Q8WUT4	740 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	NSMCE1	Q8WV22	266 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	NXPE2	Q96DL1	559 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	NUDCD1	Q96RS6	583 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	B4GALT6	Q9UBX8	382 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	LHX6	Q9UPM6	363 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	GPSM3	Q9Y4H4	160 aa		18.83	■□□□□ 0.61
ABCA2-222	ENST00000494046	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	TOR1B	O14657	336 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	GM2A	P17900	193 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	MMP13	P45452	471 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	DUSP3	P51452	185 aa	Predicted RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	NFATC4	Q14934	902 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	AGER	Q15109	404 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	PTPRR	Q15256	657 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ALG11	Q2TAA5	492 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	LRRC38	Q5VT99	294 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	LRIG3	Q6UXM1	1119 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZNF771	Q7L3S4	317 aa	Predicted RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	CCDC50	Q8IVM0	306 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	BBS5	Q8N3I7	341 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	DCBLD1	Q8N8Z6	715 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	PCDH19	Q8TAB3	1148 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	SLCO2A1	Q92959	643 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	MGME1	Q9BQP7	344 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ABCG4	Q9H172	646 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	NT5M	Q9NPB1	228 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	HOMER3	Q9NSC5	361 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	PCDHB1	Q9Y5F3	818 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ITPR1	Q14643	2758 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	YY2	O15391	372 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	HTRA2	O43464	458 aa	Predicted RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ECEL1	O95672	775 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ANXA6	P08133	673 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	HTR1B	P28222	390 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	HK3	P52790	923 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	TRAF2	Q12933	501 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ACOX1	Q15067	660 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ANKRD20A8P	Q5CZ79	823 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	DENND2C	Q68D51	928 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	NCBP2-AS2	Q69YL0	99 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	EFL1	Q7Z2Z2	1120 aa	Known RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	PELI3	Q8N2H9	469 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	MAPK15	Q8TD08	544 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	RBM41	Q96IZ5	413 aa	Known RBP	18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	FMO2	Q99518	471 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZDHHC18	Q9NUE0	388 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	SNX24	Q9Y343	169 aa		18.82	■□□□□ 0.6
ABCA2-222	ENST00000494046	MYLK	Q15746	1914 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	GOLGA6C	A6NDK9	693 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	LMO7DN	F2Z398	122 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	TPP1	O14773	563 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	CASC3	O15234	703 aa	Known RBP	18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	CP	P00450	1065 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	GOLGA6D	P0CG33	693 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	HSD17B3	P37058	310 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	ITK	Q08881	620 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	MTM1	Q13496	603 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	NR0B2	Q15466	257 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	ZFYVE27	Q5T4F4	411 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	SLC35F3	Q8IY50	421 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	RCOR2	Q8IZ40	523 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	GRK7	Q8WTQ7	553 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	DCBLD2	Q96PD2	775 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	FAM129A	Q9BZQ8	928 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	USP29	Q9HBJ7	922 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	EVA1B	Q9NVM1	165 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	GOLGA6A	Q9NYA3	693 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	KL	Q9UEF7	1012 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	DOLK	Q9UPQ8	538 aa		18.81	■□□□□ 0.6
ABCA2-222	ENST00000494046	NBEA	Q8NFP9	2946 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046		A0A0U1RQS6	177 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	CFAP69	A5D8W1	941 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	SOCS5	O75159	536 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	GP1BA	P07359	652 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	CTSE	P14091	401 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	TGM2	P21980	687 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	BLK	P51451	505 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	SRP54	P61011	504 aa	Known RBP	18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	COL28A1	Q2UY09	1125 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	PERM1	Q5SV97	790 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	C6orf132	Q5T0Z8	1188 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	TMC3	Q7Z5M5	1100 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	C1orf54	Q8WWF1	131 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	FUBP1	Q96AE4	644 aa	Known RBP	18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	PDXP	Q96GD0	296 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	WDR92	Q96MX6	357 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	BOC	Q9BWV1	1114 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	OSBPL8	Q9BZF1	889 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	NRSN2	Q9GZP1	204 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	MRPL40	Q9NQ50	206 aa	Known RBP	18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	SIRPG	Q9P1W8	387 aa		18.8	■□□□□ 0.6
ABCA2-222	ENST00000494046	GULP1	Q9UBP9	304 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms