RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 KLC3Q6P597 504 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 DNAJB7Q7Z6W7 309 aaPredicted RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 PDSS2Q86YH6 399 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 ACTRT2Q8TDY3 377 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 PDCD6IPQ8WUM4 868 aaKnown RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 UBXN10Q96LJ8 280 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 NEMP2A6NFY4 417 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 NPHS1O60500 1241 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 URODP06132 367 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 ARSAP15289 507 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 PPP3CCP48454 512 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 DNAJB13P59910 316 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 CYTH1Q15438 398 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 GSTA3Q16772 222 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 RNF219Q5W0B1 726 aaPredicted RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 MRNIPQ6NTE8 343 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 GPR150Q8NGU9 434 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 ANKRD49Q8WVL7 239 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 AUTS2Q8WXX7 1259 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 CATSPER2Q96P56 530 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 OSBPL10Q9BXB5 764 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 KLHL4Q9C0H6 718 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 MUC3BQ9H195 1237 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 NCKIPSDQ9NZQ3 722 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 PDP2Q9P2J9 529 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 AK5Q9Y6K8 562 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 GRID2O43424 1007 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 WISP3O95389 354 aaPredicted RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 RBP1P09455 135 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 TCN1P20061 433 aaPredicted RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 MRPS22P82650 360 aaKnown RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 PFKPQ01813 784 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 MED21Q13503 144 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 MMEL1Q495T6 779 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 PGM2L1Q6PCE3 622 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 TRIM67Q6ZTA4 783 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 PIWIL4Q7Z3Z4 852 aaKnown RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 RMDN1Q96DB5 314 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 NR1H4Q96RI1 486 aaPredicted RBP13.76□□□□□ -0.21
VCP-207ENST00000493886 VTI1BQ9UEU0 232 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 ARHGAP26Q9UNA1 814 aa13.76□□□□□ -0.21
VCP-207ENST00000493886 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 TMEM233B4DJY2 109 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 SLCO1B7G3V0H7 640 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 STX16-NPEPL1H3BU86 382 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 TPPPO94811 219 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 DEFB103AP81534 67 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 CBX3Q13185 183 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 SEMA3AQ14563 771 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 ACAP2Q15057 778 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 TMEM207Q6UWW9 146 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 TMEM150AQ86TG1 271 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 HERC6Q8IVU3 1022 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 FBXW8Q8N3Y1 598 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 SMYD1Q8NB12 490 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 OR4L1Q8NH43 312 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 CATSPERZQ9NTU4 200 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 PGM3O95394 542 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 CRTAMO95727 393 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 C1RP00736 705 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 SLC4A1P02730 911 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 ENO3P13929 434 aaPredicted RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 KCNA5P22460 613 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 SMAD3P84022 425 aaKnown RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 GPR158Q5T848 1215 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 C1orf53Q5VUE5 145 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 ZNF549Q6P9A3 640 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 FBXL19Q6PCT2 694 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 PIM3Q86V86 326 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 DIS3LQ8TF46 1054 aaKnown RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 CCDC126Q96EE4 140 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 CDKN2AIPNLQ96HQ2 116 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 ZFRQ96KR1 1074 aaKnown RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
VCP-207ENST00000493886 CYP4F12Q9HCS2 524 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
VCP-207ENST00000493886 ABHD14A-ACY1A0A1B0GW23 586 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 A8MT66 165 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 SCAMP3O14828 347 aaKnown RBP13.74□□□□□ -0.21
VCP-207ENST00000493886 PRLP01236 227 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
VCP-207ENST00000493886 FDXRP22570 491 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 PIK3R1P27986 724 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 GSTT1P30711 240 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 SLC26A3P40879 764 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 GRIA2P42262 883 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 EPHB3P54753 998 aa13.74□□□□□ -0.21
VCP-207ENST00000493886 ARF5P84085 180 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms