RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	WDR92	Q96MX6	357 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	GPR63	Q9BZJ6	419 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	WDR26	Q9H7D7	661 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	APOBEC3B	Q9UH17	382 aa	Known RBP	18.52	■□□□□ 0.56
C4A-256	ENST00000490663	ZNF148	Q9UQR1	794 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	C5orf60	A6NFR6	353 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	TRIM38	O00635	465 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	TOP3B	O95985	862 aa	Known RBP	18.51	■□□□□ 0.55
C4A-256	ENST00000490663	IFNB1	P01574	187 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	CEACAM1	P13688	526 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	TSHR	P16473	764 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	KCNJ1	P48048	391 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	POLD2	P49005	469 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	SPINT3	P49223	89 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	KIAA1024L	P59773	190 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	DNAJC3	Q13217	504 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	PTK2B	Q14289	1009 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	PTPRCAP	Q14761	206 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	TRIP6	Q15654	476 aa	Known RBP	18.51	■□□□□ 0.55
C4A-256	ENST00000490663	CCDC70	Q6NSX1	233 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	PNPLA1	Q8N8W4	532 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	LRRC61	Q9BV99	259 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	ZFYVE1	Q9HBF4	777 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	ARFGAP3	Q9NP61	516 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	PIH1D1	Q9NWS0	290 aa	Known RBP	18.51	■□□□□ 0.55
C4A-256	ENST00000490663	KL	Q9UEF7	1012 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	JRKL	Q9Y4A0	524 aa		18.51	■□□□□ 0.55
C4A-256	ENST00000490663	FADS2P1	A8MWK0	482 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	CACNB4	O00305	520 aa	Predicted RBP	18.5	■□□□□ 0.55
C4A-256	ENST00000490663	YKT6	O15498	198 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	KIF5C	O60282	957 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	GCAT	O75600	419 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	ANXA9	O76027	345 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	ZSCAN5DP	P0CG00	497 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	GIMD1	P0DJR0	217 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	ADRA1A	P35348	466 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	HNRNPK	P61978	463 aa	Known RBP eCLIP	18.5	■□□□□ 0.55
C4A-256	ENST00000490663	CDK3	Q00526	305 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	PPARD	Q03181	441 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	PRPSAP1	Q14558	356 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	DEFB133	Q30KQ1	61 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	PRRT3	Q5FWE3	981 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	TTC30B	Q8N4P2	665 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	GPR26	Q8NDV2	337 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	COG1	Q8WTW3	980 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	CLPB	Q9H078	707 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	MAGEE1	Q9HCI5	957 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	PKD2L2	Q9NZM6	624 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	FTSJ1	Q9UET6	329 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663	TMEM98	Q9Y2Y6	226 aa		18.5	■□□□□ 0.55
C4A-256	ENST00000490663		H3BM21	787 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	ZNF185	O15231	689 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	AQP9	O43315	295 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	SIGLEC6	O43699	453 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	MYCLP1	P12525	358 aa	Predicted RBP	18.49	■□□□□ 0.55
C4A-256	ENST00000490663	HTR1B	P28222	390 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	TRIM23	P36406	574 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	TNNT3	P45378	269 aa	Predicted RBP	18.49	■□□□□ 0.55
C4A-256	ENST00000490663	SRP54	P61011	504 aa	Known RBP	18.49	■□□□□ 0.55
C4A-256	ENST00000490663	FOXC1	Q12948	553 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	ZNF648	Q5T619	568 aa	Predicted RBP	18.49	■□□□□ 0.55
C4A-256	ENST00000490663	TMC3	Q7Z5M5	1100 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	SLCO6A1	Q86UG4	719 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	OR56A4	Q8NGH8	313 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	CCHCR1	Q8TD31	782 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	CNDP2	Q96KP4	475 aa	Known RBP	18.49	■□□□□ 0.55
C4A-256	ENST00000490663	OSBPL9	Q96SU4	736 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	TBL1Y	Q9BQ87	522 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	AP1M1	Q9BXS5	423 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	CYP4F12	Q9HCS2	524 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	PHPT1	Q9NRX4	125 aa	Predicted RBP	18.49	■□□□□ 0.55
C4A-256	ENST00000490663	KCTD3	Q9Y597	815 aa		18.49	■□□□□ 0.55
C4A-256	ENST00000490663	GPR39	O43194	453 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	RASGRP1	O95267	797 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	FUCA1	P04066	466 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	FGF1	P05230	155 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	FTH1P19	P0C7X4	201 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	BPI	P17213	487 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	HLA-DPA1	P20036	260 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	SPINK2	P20155	84 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	TERF1	P54274	439 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	DPT	Q07507	201 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	INAVA	Q3KP66	663 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	HENMT1	Q5T8I9	393 aa	Known RBP	18.48	■□□□□ 0.55
C4A-256	ENST00000490663	MARK2	Q7KZI7	788 aa	Known RBP	18.48	■□□□□ 0.55
C4A-256	ENST00000490663	ZNF765	Q7L2R6	523 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	GLT6D1	Q7Z4J2	308 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	PDCD7	Q8N8D1	485 aa	Known RBP	18.48	■□□□□ 0.55
C4A-256	ENST00000490663	PRELID2	Q8N945	189 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	CCL4L1	Q8NHW4	92 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	SPATA16	Q9BXB7	569 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	TEX101	Q9BY14	249 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	SLC13A1	Q9BZW2	595 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	FAM83D	Q9H4H8	585 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	TOR4A	Q9NXH8	423 aa		18.48	■□□□□ 0.55
C4A-256	ENST00000490663	OAS3	Q9Y6K5	1087 aa	Known RBP	18.48	■□□□□ 0.55
C4A-256	ENST00000490663	PRSS38	A1L453	326 aa		18.47	■□□□□ 0.55
C4A-256	ENST00000490663	TOR1B	O14657	336 aa		18.47	■□□□□ 0.55
C4A-256	ENST00000490663	LDOC1	O95751	146 aa	Predicted RBP	18.47	■□□□□ 0.55
C4A-256	ENST00000490663	HK3	P52790	923 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms