RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 THAP4Q8WY91 577 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 ISG20Q96AZ6 181 aaKnown RBP7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 KLHL32Q96NJ5 620 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 SMAD5Q99717 465 aaKnown RBP7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 C7orf25Q9BPX7 421 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 LGR4Q9BXB1 951 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 ACSS2Q9NR19 701 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 SLC12A6Q9UHW9 1150 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 OSGIN2Q9Y236 505 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 PIKFYVEQ9Y2I7 2098 aa7.11□□□□□ -1.27
PDLIM1-203ENST00000490391 HRNRQ86YZ3 2850 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 PRSS38A1L453 326 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 C21orf140B9A014 251 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 M0QYV0 167 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 PDXKO00764 312 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 SART1O43290 800 aaKnown RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 PAGE1O75459 146 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ADCY5O95622 1261 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 PCCBP05166 539 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 STSP08842 583 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 HOXC4P09017 264 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 SLC2A3P11169 496 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 CD99P14209 185 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 AK4P27144 223 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 CCR1P32246 355 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 TRIM23P36406 574 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 STAT1P42224 750 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 FASLGP48023 281 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 GDF10P55107 478 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 RPS18P62269 152 aaKnown RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 DNM1Q05193 864 aaKnown RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ENPEPQ07075 957 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 FOXM1Q08050 763 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 CUL2Q13617 745 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 RAPGEF1Q13905 1077 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 TAF5Q15542 800 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ZNF630Q2M218 657 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 KRT39Q6A163 491 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 RETSATQ6NUM9 610 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 INTS8Q75QN2 995 aaKnown RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 BRAPQ7Z569 592 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 TTC7BQ86TV6 843 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 PELI3Q8N2H9 469 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 GLIS1Q8NBF1 620 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ADAMTS17Q8TE56 1095 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ITLN2Q8WWU7 325 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 STAMBPL1Q96FJ0 436 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 OSBPL1AQ9BXW6 950 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 LRRC27Q9C0I9 530 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 BRD8Q9H0E9 1235 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 MMRN2Q9H8L6 949 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 AKIRIN1Q9H9L7 192 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 POPDC2Q9HBU9 364 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 SLC24A3Q9HC58 644 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 LHX9Q9NQ69 397 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 ANLNQ9NQW6 1124 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 KIAA1257Q9ULG3 409 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 COPG1Q9Y678 874 aaKnown RBP7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 CUBNO60494 3623 aa7.1□□□□□ -1.27
PDLIM1-203ENST00000490391 CXorf51AA0A1B0GTR3 108 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 SSU72P8A0A1W2PR75 194 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 ILVBLA1L0T0 632 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 FAM221AA4D161 298 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 TMEM200CA6NKL6 621 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 DRGXA6NNA5 263 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 KIAA1324LA8MWY0 1029 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CACNB4O00305 520 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 KRIT1O00522 736 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CDK2AP1O14519 115 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 KIAA0754O94854 1291 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 GSRP00390 522 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CALCAP01258 141 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 ANKRD34CP0C6C1 535 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 COX6B1P14854 86 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 FSTP19883 344 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 KELP23276 732 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 SSTR2P30874 369 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 GPD2P43304 727 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 NOP2P46087 812 aaKnown RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 YWHAZP63104 245 aaKnown RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 STK4Q13043 487 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CNGA2Q16280 664 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 OTUD1Q5VV17 481 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 SLC30A9Q6PML9 568 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 BNC2Q6ZN30 1099 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 TFAP2DQ7Z6R9 452 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 FJX1Q86VR8 437 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 NXPE1Q8N323 547 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 FBXL13Q8NEE6 735 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 OR2AP1Q8NGE2 309 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 SEC14L1Q92503 715 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 ARHGEF2Q92974 986 aaKnown RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 HDAC11Q96DB2 347 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 GSDMCQ9BYG8 508 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CUEDC2Q9H467 287 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 FAM204AQ9H8W3 233 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CARS2Q9HA77 564 aaKnown RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 CHST11Q9NPF2 352 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms