RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 EPHB6O15197 1021 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 DAPK3O43293 454 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 HTRA2O43464 458 aaPredicted RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 STK17BO94768 372 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 CPP00450 1065 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 TCN2P20062 427 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 NR1D1P20393 614 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 LHCGRP22888 699 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 TEAD1P28347 426 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 MAN1A1P33908 653 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 FASLGP48023 281 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 RENBPP51606 427 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 MC1RQ01726 317 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 OGDHQ02218 1023 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 IL10RBQ08334 325 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 CA9Q16790 459 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 DPCR1Q3MIW9 517 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 TCP11X2Q5H9J9 407 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 Q6ZVL8 140 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 ARHGAP22Q7Z5H3 698 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 ATCAYQ86WG3 371 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 NPWQ8N729 165 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 OR10G6Q8NH81 332 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 SLC37A2Q8TED4 501 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 SCARF2Q96GP6 870 aaPredicted RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 PSKH2Q96QS6 385 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 OR2M4Q96R27 311 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 FBXO8Q9NRD0 319 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 FAM207AQ9NSI2 230 aaPredicted RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 SEPT11Q9NVA2 429 aaKnown RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 TMEM98Q9Y2Y6 226 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 TMEM184BQ9Y519 407 aaPredicted RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 PCDHGC4Q9Y5F7 938 aa13.9□□□□□ -0.18
VARS-227ENST00000489979 MRPS18BQ9Y676 258 aaKnown RBP13.9□□□□□ -0.18
VARS-227ENST00000489979 MYO9AB2RTY4 2548 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 MAP3K6O95382 1288 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 CYP2A6P11509 494 aaPredicted RBP13.89□□□□□ -0.19
VARS-227ENST00000489979 ERCC2P18074 760 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 GPR1P46091 355 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 MLLT10P55197 1068 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 SLC10A7Q0GE19 358 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 LBRQ14739 615 aaKnown RBP13.89□□□□□ -0.19
VARS-227ENST00000489979 PTPRRQ15256 657 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 PPP1R15BQ5SWA1 713 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 WDR74Q6RFH5 385 aaPredicted RBP13.89□□□□□ -0.19
VARS-227ENST00000489979 RFLNAQ6ZTI6 216 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 MARK2Q7KZI7 788 aaKnown RBP13.89□□□□□ -0.19
VARS-227ENST00000489979 TSPAN33Q86UF1 283 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 TP53INP2Q8IXH6 220 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 FNIP1Q8TF40 1166 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 NCSTNQ92542 709 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 KCTD15Q96SI1 283 aaPredicted RBP13.89□□□□□ -0.19
VARS-227ENST00000489979 ZPBPQ9BS86 351 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 TRIT1Q9H3H1 467 aaKnown RBP13.89□□□□□ -0.19
VARS-227ENST00000489979 CD84Q9UIB8 345 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 PHTF1Q9UMS5 762 aa13.89□□□□□ -0.19
VARS-227ENST00000489979 RP1L1Q8IWN7 2480 aaPredicted RBP13.88□□□□□ -0.19
VARS-227ENST00000489979 A0A1W2PQ67 120 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 NPIPB15A6NHN6 443 aaPredicted RBP13.88□□□□□ -0.19
VARS-227ENST00000489979 K7EM74 188 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 PSMD11O00231 422 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 SOCS5O75159 536 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 EML2O95834 649 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 DLGAP3O95886 979 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 SOD1P00441 154 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 KRT7P08729 469 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 TNFAIP3P21580 790 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 F8A1P23610 371 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 NFKBIAP25963 317 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 STAT5AP42229 794 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 DPTQ07507 201 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 ZNF235Q14590 738 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 SYCP1Q15431 976 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
VARS-227ENST00000489979 PYCR3Q53H96 274 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.88□□□□□ -0.19
VARS-227ENST00000489979 TMCO4Q5TGY1 634 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 RFX8Q6ZV50 586 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 TECPR1Q7Z6L1 1165 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 TRIM74Q86UV6 250 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 SFRP1Q8N474 314 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 TEX19Q8NA77 164 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 KLHL3Q9UH77 587 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 KCTD3Q9Y597 815 aa13.88□□□□□ -0.19
VARS-227ENST00000489979 A0A0U1RQS6 177 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 EIF3CLB5ME19 914 aaKnown RBP13.87□□□□□ -0.19
VARS-227ENST00000489979 POLR1CO15160 346 aaPredicted RBP13.87□□□□□ -0.19
VARS-227ENST00000489979 DESP17661 470 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
VARS-227ENST00000489979 COPB1P53618 953 aaKnown RBP13.87□□□□□ -0.19
VARS-227ENST00000489979 HHEXQ03014 270 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 TRAF2Q12933 501 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 NFATC2Q13469 925 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 BECN1Q14457 450 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 ERMARDQ5T6L9 678 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms