RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NETO1Q8TDF5 533 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 GRK7Q8WTQ7 553 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 ELF4Q99607 663 aaPredicted RBP14.36□□□□□ -0.11
HLA-F-229ENST00000489502 LGR4Q9BXB1 951 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 TRABDQ9H4I3 376 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 DNAJC28Q9NX36 388 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 PNMA8BQ9ULN7 279 aaPredicted RBP14.36□□□□□ -0.11
HLA-F-229ENST00000489502 NEU2Q9Y3R4 380 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 KCTD3Q9Y597 815 aa14.36□□□□□ -0.11
HLA-F-229ENST00000489502 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
HLA-F-229ENST00000489502 SPTY2D1-AS1A0A0U1RR47 76 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 A0A1B0GTQ1 180 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 TCRBV7S3A2A0A539 114 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 CCDC78A2IDD5 438 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 ERI2A8K979 691 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 FADS2P1A8MWK0 482 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 SCAMP1O15126 338 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 INPP4BO15327 924 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 GPR39O43194 453 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 PSMD3O43242 534 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 SUN1O94901 812 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 EPHA8P29322 1005 aaPredicted RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 KIAA1024LP59773 190 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 YPEL5P62699 121 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 CDK3Q00526 305 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 DPTQ07507 201 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 C2orf54Q08AI8 447 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 EIF2B5Q13144 721 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 MSLNQ13421 630 aaPredicted RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 POU6F1Q14863 301 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 PPP1R7Q15435 360 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 SHBQ15464 509 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 TCEA2Q15560 299 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 HENMT1Q5T8I9 393 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 ANKRD22Q5VYY1 191 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 DOK6Q6PKX4 331 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 LINC00523Q86TU6 105 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 NRSN1Q8IZ57 195 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 RBFAQ8N0V3 343 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 DNAAF3Q8N9W5 541 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 FAM174AQ8TBP5 190 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 PDXPQ96GD0 296 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 SRPK1Q96SB4 655 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 TCEAL2Q9H3H9 227 aaPredicted RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 FAM83DQ9H4H8 585 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 SUDS3Q9H7L9 328 aaPredicted RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 ARNT2Q9HBZ2 717 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 FGF22Q9HCT0 170 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 EIF2B3Q9NR50 452 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
HLA-F-229ENST00000489502 DNAAF2Q9NVR5 837 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 CDV3Q9UKY7 258 aaKnown RBP14.35□□□□□ -0.11
HLA-F-229ENST00000489502 BPTFQ12830 3046 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 TMEM202A6NGA9 273 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 CACNB4O00305 520 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 CCL22O00626 93 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 TMEM63AO94886 807 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 MYCLP1P12525 358 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 HMGCLP35914 325 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 PTGIRP43119 386 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 ZNF140P52738 457 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 LIMK1P53667 647 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 DCDC1P59894 354 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 MRPS25P82663 173 aaKnown RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 TMPRSS15P98073 1019 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 CDH17Q12864 832 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 KCNJ11Q14654 390 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 TAF1AQ15573 450 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 RSPO4Q2I0M5 234 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 ALG11Q2TAA5 492 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 CCDC38Q502W7 563 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 FAM151BQ6UXP7 276 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 ADAMTSL4Q6UY14 1074 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 C4orf22Q6V702 233 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 GATAD2AQ86YP4 633 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 OXR1Q8N573 874 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 OR13C4Q8NGS5 318 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 PTCD2Q8WV60 388 aaKnown RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 WDR92Q96MX6 357 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 KRT12Q99456 494 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 TRIM51Q9BSJ1 452 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 SPATA16Q9BXB7 569 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 ERVMER34-1Q9H9K5 563 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 CASS4Q9NQ75 786 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 PHPT1Q9NRX4 125 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 KCTD5Q9NXV2 234 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 IL17CQ9P0M4 197 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 RNF14Q9UBS8 474 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 KLQ9UEF7 1012 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 ASIC3Q9UHC3 531 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 PCYOX1Q9UHG3 505 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 FEZ2Q9UHY8 353 aaPredicted RBP14.34□□□□□ -0.11
HLA-F-229ENST00000489502 KLF15Q9UIH9 416 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 DNAH14Q0VDD8 3507 aa14.34□□□□□ -0.11
HLA-F-229ENST00000489502 RGSL1A5PLK6 1076 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms