RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 RNF187Q5TA31 235 aaPredicted RBP26.74■■□□□ 1.87
HOXB3-210ENST00000489475 CBARPQ8N350 705 aaPredicted RBP26.74■■□□□ 1.87
HOXB3-210ENST00000489475 PLCD3Q8N3E9 789 aa26.74■■□□□ 1.87
HOXB3-210ENST00000489475 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.74■■□□□ 1.87
HOXB3-210ENST00000489475 TSPAN17Q96FV3 270 aa26.74■■□□□ 1.87
HOXB3-210ENST00000489475 CACNA2D2Q9NY47 1150 aa26.74■■□□□ 1.87
HOXB3-210ENST00000489475 LIMD1Q9UGP4 676 aa26.74■■□□□ 1.87
HOXB3-210ENST00000489475 ANKRD6Q9Y2G4 727 aa26.74■■□□□ 1.87
HOXB3-210ENST00000489475 TICRRQ7Z2Z1 1910 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 PHGDHO43175 533 aaKnown RBP26.73■■□□□ 1.87
HOXB3-210ENST00000489475 EPHX1P07099 455 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 GSTA1P08263 222 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 DHRS4L1P0CG22 281 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 BPIP17213 487 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 LHCGRP22888 699 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 CSRP3P50461 194 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 ZKSCAN8Q15776 578 aaPredicted RBP26.73■■□□□ 1.87
HOXB3-210ENST00000489475 PSAPL1Q6NUJ1 521 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 FAM151BQ6UXP7 276 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 TAS2R42Q7RTR8 314 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 DSG4Q86SJ6 1040 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 PIANPQ8IYJ0 282 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 CHMP6Q96FZ7 201 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 FAM96AQ9H5X1 160 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 PCDH12Q9NPG4 1184 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 HCN2Q9UL51 889 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 PPM1HQ9ULR3 514 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 VWA7Q9Y334 891 aa26.73■■□□□ 1.87
HOXB3-210ENST00000489475 SRP72O76094 671 aaKnown RBP26.72■■□□□ 1.87
HOXB3-210ENST00000489475 HNRNPLP14866 589 aaKnown RBP eCLIP26.72■■□□□ 1.87
HOXB3-210ENST00000489475 ZNF30P17039 623 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 VIPR1P32241 457 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 SPAM1P38567 509 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 CDKN1CP49918 316 aaPredicted RBP26.72■■□□□ 1.87
HOXB3-210ENST00000489475 PTPN5P54829 565 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 PTSQ03393 145 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 HECTD2Q5U5R9 776 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 CEP97Q8IW35 865 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 ARMC2Q8NEN0 867 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 PIP4K2CQ8TBX8 421 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 ACOX2Q99424 681 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 KCNK12Q9HB15 430 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 ZDHHC4Q9NPG8 344 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 IL26Q9NPH9 171 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 TRPV5Q9NQA5 729 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 SARDHQ9UL12 918 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 UBA6A0AVT1 1052 aaPredicted RBP26.72■■□□□ 1.87
HOXB3-210ENST00000489475 SPECC1L-ADORA2AF8WAN1 911 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 NPC1O15118 1278 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 PRAMEF1O95521 474 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 CHRM1P11229 460 aaPredicted RBP26.72■■□□□ 1.87
HOXB3-210ENST00000489475 CTHP32929 405 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 PDK4Q16654 411 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 N4BP2L1Q5TBK1 243 aaPredicted RBP26.72■■□□□ 1.87
HOXB3-210ENST00000489475 FAM45BPQ6NSW5 357 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 CHPFQ8IZ52 775 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 FAM45AQ8TCE6 357 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 TSNARE1Q96NA8 513 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 FAM129BQ96TA1 746 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 RABEP2Q9H5N1 569 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 ACOT9Q9Y305 439 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 STON1Q9Y6Q2 735 aa26.72■■□□□ 1.87
HOXB3-210ENST00000489475 GLYATL1P3A0A0U1RQE8 302 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 SLC35E2BP0CK96 405 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 ITGALP20701 1170 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 ZDHHC20Q5W0Z9 365 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 PARS2Q7L3T8 475 aaKnown RBP26.71■■□□□ 1.87
HOXB3-210ENST00000489475 CLEC14AQ86T13 490 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 LCA5Q86VQ0 697 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 SLC44A3Q8N4M1 653 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 ZNF513Q8N8E2 541 aaPredicted RBP26.71■■□□□ 1.87
HOXB3-210ENST00000489475 LPGAT1Q92604 370 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 PPP1R16AQ96I34 528 aa26.71■■□□□ 1.87
HOXB3-210ENST00000489475 ZNF317Q96PQ6 595 aaPredicted RBP26.71■■□□□ 1.87
HOXB3-210ENST00000489475 CDX2Q99626 313 aaPredicted RBP26.71■■□□□ 1.87
HOXB3-210ENST00000489475 PHF7Q9BWX1 381 aaPredicted RBP26.71■■□□□ 1.87
HOXB3-210ENST00000489475 TCF20Q9UGU0 1960 aaKnown RBP26.7■■□□□ 1.87
HOXB3-210ENST00000489475 UNC80Q8N2C7 3258 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 EYSQ5T1H1 3165 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 IL1BP01584 269 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 VIMP08670 466 aaKnown RBP26.7■■□□□ 1.87
HOXB3-210ENST00000489475 COL6A2P12110 1019 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 ITGB7P26010 798 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 GMPRP36959 345 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 PPARGP37231 505 aaPredicted RBP26.7■■□□□ 1.87
HOXB3-210ENST00000489475 SERPINB4P48594 390 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 IRF9Q00978 393 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 ERAP2Q6P179 960 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 CERS6Q6ZMG9 384 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 CCDC63Q8NA47 563 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 BCAS4Q8TDM0 211 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 PPM1EQ8WY54 764 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 TTC1Q99614 292 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 CCDC68Q9H2F9 335 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 PRSS16Q9NQE7 514 aa26.7■■□□□ 1.87
HOXB3-210ENST00000489475 WDR91A4D1P6 747 aa26.69■■□□□ 1.86
HOXB3-210ENST00000489475 ANTXRLA6NF34 631 aa26.69■■□□□ 1.86
HOXB3-210ENST00000489475 TCP11X1B4DZS4 312 aa26.69■■□□□ 1.86
HOXB3-210ENST00000489475 GAPDHSO14556 408 aaPredicted RBP26.69■■□□□ 1.86
HOXB3-210ENST00000489475 NFATC2Q13469 925 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms