RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RPS14P62263 151 aaKnown RBP20.82■□□□□ 0.92
SND1-214ENST00000489417 PRKCQQ04759 706 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 CACNG1Q06432 222 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 CNTN1Q12860 1018 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 TYSND1Q2T9J0 566 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 ZDHHC20Q5W0Z9 365 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 FAM151BQ6UXP7 276 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 LDB1Q86U70 411 aaPredicted RBP20.82■□□□□ 0.92
SND1-214ENST00000489417 C4orf33Q8N1A6 199 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 DCLK2Q8N568 766 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 ARFGAP2Q8N6H7 521 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 RPLP0P6Q8NHW5 317 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 SMC6Q96SB8 1091 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 ARHGEF3Q9NR81 526 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 ITM2BQ9Y287 266 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 MTO1Q9Y2Z2 717 aaKnown RBP20.82■□□□□ 0.92
SND1-214ENST00000489417 GLYATL1P3A0A0U1RQE8 302 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 A0A1W2PQF6 199 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 C19orf67A6NJJ6 358 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 GAPDHSO14556 408 aaPredicted RBP20.81■□□□□ 0.92
SND1-214ENST00000489417 AREL1O15033 823 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 RFPL1O75677 317 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 SRP72O76094 671 aaKnown RBP20.81■□□□□ 0.92
SND1-214ENST00000489417 HAUS5O94927 633 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 PRSS56P0CW18 603 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 C5AR1P21730 350 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 P2RY2P41231 377 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 SPINT3P49223 89 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 ILF2Q12905 390 aaKnown RBP20.81■□□□□ 0.92
SND1-214ENST00000489417 ZNF789Q5FWF6 425 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 AARS2Q5JTZ9 985 aaKnown RBP20.81■□□□□ 0.92
SND1-214ENST00000489417 EOGTQ5NDL2 527 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 CNSTQ6PJW8 725 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 KDM7AQ6ZMT4 941 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 HSD11B1LQ7Z5J1 315 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 GPR26Q8NDV2 337 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.81■□□□□ 0.92
SND1-214ENST00000489417 RAB7BQ96AH8 199 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 TCF12Q99081 682 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 KLF6Q99612 283 aaPredicted RBP20.81■□□□□ 0.92
SND1-214ENST00000489417 GPR22Q99680 433 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 SELENOSQ9BQE4 189 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 FAM96AQ9H5X1 160 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 IL26Q9NPH9 171 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 RAD18Q9NS91 495 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 MYO10Q9HD67 2058 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 EYSQ5T1H1 3165 aa20.81■□□□□ 0.92
SND1-214ENST00000489417 PRAMEF1O95521 474 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 KRT4P19013 534 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 ITGALP20701 1170 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 PMLP29590 882 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 SERPINB8P50452 374 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 CLCN5P51795 746 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 TMEM52BQ4KMG9 183 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 PIP5KL1Q5T9C9 394 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 PSAPL1Q6NUJ1 521 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 LIPIQ6XZB0 460 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 RFLNAQ6ZTI6 216 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 CACUL1Q86Y37 369 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 PIANPQ8IYJ0 282 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 AADATQ8N5Z0 425 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 PNPLA1Q8N8W4 532 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 ALKBH8Q96BT7 664 aaKnown RBP20.8■□□□□ 0.92
SND1-214ENST00000489417 PLEKHG4BQ96PX9 1271 aa20.8■□□□□ 0.92
SND1-214ENST00000489417 SSU72Q9NP77 194 aaKnown RBP20.8■□□□□ 0.92
SND1-214ENST00000489417 INTS10Q9NVR2 710 aaKnown RBP20.8■□□□□ 0.92
SND1-214ENST00000489417 ZNF106Q9H2Y7 1883 aaKnown RBP20.8■□□□□ 0.92
SND1-214ENST00000489417 SPTBN5Q9NRC6 3674 aaKnown RBP20.8■□□□□ 0.92
SND1-214ENST00000489417 RGSL1A5PLK6 1076 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 H0Y858 1186 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 GOLGA8RI6L899 631 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 PSMD11O00231 422 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 TPP1O14773 563 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 PFDN6O15212 129 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 ELFN1P0C7U0 828 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 PYGBP11216 843 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 DRD3P35462 400 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 CCNFP41002 786 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 POLD2P49005 469 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 CDKN1CP49918 316 aaPredicted RBP20.79■□□□□ 0.92
SND1-214ENST00000489417 SLC18A2Q05940 514 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 CHRNA6Q15825 494 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 TAS2R42Q7RTR8 314 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 SNX20Q7Z614 316 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 ISL2Q96A47 359 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 CD248Q9HCU0 757 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 WNT16Q9UBV4 365 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 MMP17Q9ULZ9 603 aa20.79■□□□□ 0.92
SND1-214ENST00000489417 FAM95CA0A1B0GW59 222 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 SPAG7O75391 227 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 NDUFS3O75489 264 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 ALDOAP04075 364 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 TTPAP49638 278 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 LIG3P49916 1009 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 ATP1A2P50993 1020 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 GYS2P54840 703 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 DCDC1P59894 354 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 RNF187Q5TA31 235 aaPredicted RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 SH2D5Q6ZV89 423 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 HDDC3Q8N4P3 179 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms