RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GGNBP1Q5YKI7 109 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 DUS1LQ6P1R4 473 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 KRBA2Q6ZNG9 492 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 ARMC8Q8IUR7 673 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 BEST3Q8N1M1 668 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 PCDH20Q8N6Y1 951 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 NR4A3Q92570 626 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 GTF3C6Q969F1 213 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 SH3GL2Q99962 352 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 IFIH1Q9BYX4 1025 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 VPS33BQ9H267 617 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 TTC7AQ9ULT0 858 aaPredicted RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 AAR2Q9Y312 384 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 AKR1B15C9JRZ8 316 aaPredicted RBP3.6□□□□□ -1.83
RFC4-213ENST00000489028 LINC01565O15544 149 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 KCNA5P22460 613 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 MARK3P27448 753 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 EIF3BP55884 814 aaKnown RBP3.6□□□□□ -1.83
RFC4-213ENST00000489028 ISL1P61371 349 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 DRAP1Q14919 205 aaPredicted RBP3.6□□□□□ -1.83
RFC4-213ENST00000489028 C6orf141Q5SZD1 244 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 CDC73Q6P1J9 531 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 DSTYKQ6XUX3 929 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 DPPA4Q7L190 304 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 NRROSQ86YC3 692 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 CERS3Q8IU89 383 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 TSPYL6Q8N831 410 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 MAB21L3Q8N8X9 362 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 ACVR1CQ8NER5 493 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 IL17REQ8NFR9 667 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 METTL6Q8TCB7 284 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 IGSF8Q969P0 613 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 SAAL1Q96ER3 474 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 PERPQ96FX8 193 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 TBATAQ96M53 351 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 MTERF1Q99551 399 aaKnown RBP3.6□□□□□ -1.83
RFC4-213ENST00000489028 MMP28Q9H239 520 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 ASAH2Q9NR71 780 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 PADI1Q9ULC6 663 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 AMDHD2Q9Y303 409 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 OR2W1Q9Y3N9 320 aa3.6□□□□□ -1.83
RFC4-213ENST00000489028 FAM237AA0A1B0GTK4 181 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 A0A1W2PQF6 199 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 GOLGA6L9A6NEM1 432 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 EGFP01133 1207 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 SP1P08047 785 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 UBL4AP11441 157 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 TCEA1P23193 301 aaKnown RBP3.59□□□□□ -1.83
RFC4-213ENST00000489028 ARL1P40616 181 aaPredicted RBP3.59□□□□□ -1.83
RFC4-213ENST00000489028 CDONQ4KMG0 1287 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 GPATCH4Q5T3I0 446 aaKnown RBP3.59□□□□□ -1.83
RFC4-213ENST00000489028 MARK2Q7KZI7 788 aaKnown RBP3.59□□□□□ -1.83
RFC4-213ENST00000489028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.59□□□□□ -1.83
RFC4-213ENST00000489028 SRBD1Q8N5C6 995 aaKnown RBP3.59□□□□□ -1.83
RFC4-213ENST00000489028 LMNTD1Q8N9Z9 388 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 OR5R1Q8NH85 324 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 MAGEC3Q8TD91 643 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 KCNG4Q8TDN1 519 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 ORAI1Q96D31 301 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 FEM1CQ96JP0 617 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 ACOX2Q99424 681 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 TMEM47Q9BQJ4 181 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 PREBQ9HCU5 417 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 ZFP57Q9NU63 452 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 ACSS1Q9NUB1 689 aaPredicted RBP3.59□□□□□ -1.83
RFC4-213ENST00000489028 PGAP2Q9UHJ9 254 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 HAO1Q9UJM8 370 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 GTF2A1LQ9UNN4 478 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 LOXL2Q9Y4K0 774 aa3.59□□□□□ -1.83
RFC4-213ENST00000489028 ASPDHA6ND91 283 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 PRR23AA6NEV1 266 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 LILRA5A6NI73 299 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 ERVV-2B6SEH9 535 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 C16orf97H3BN30 126 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 PAGE4O60829 102 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 NKX2-2O95096 273 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 CRYAAP02489 173 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 RRM1P23921 792 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 CASP6P55212 293 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 TAS2R38P59533 333 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 CSNK2A1P68400 391 aaPredicted RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 CEBPZQ03701 1054 aaKnown RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 RUNX1T1Q06455 604 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 TMEM115Q12893 351 aaPredicted RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 TBX2Q13207 712 aaPredicted RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 SYT16Q17RD7 645 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 CCDC96Q2M329 555 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 FRG2Q64ET8 278 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 SIGIRRQ6IA17 410 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 TSSK4Q6SA08 328 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 GDPD4Q6W3E5 623 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 RAD9BQ6WBX8 426 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 ASB18Q6ZVZ8 466 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 R3HCC1LQ7Z5L2 792 aaKnown RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 KMT5CQ86Y97 462 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 DCUN1D3Q8IWE4 304 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 IL17RCQ8NAC3 791 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 CSNK2A3Q8NEV1 391 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 OR13A1Q8NGR1 328 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms