RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 KRT87PA6NCN2 255 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 M0QX08 132 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 VWA5AO00534 786 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 FADS2O95864 444 aaKnown RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 RBP1P09455 135 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 TBXAS1P24557 533 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 INSCQ1MX18 579 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 FUNDC1Q8IVP5 155 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 MICU2Q8IYU8 434 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 TRPV3Q8NET8 790 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 BRSK1Q8TDC3 778 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 OSBPL2Q9H1P3 480 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ZBTB20Q9HC78 741 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 MAP10Q9P2G4 905 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ARHGAP28Q9P2N2 729 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 CRNNQ9UBG3 495 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 VWA7Q9Y334 891 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 MAU2Q9Y6X3 613 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 TRIM64A6NGJ6 449 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 PPP6CO00743 305 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 SEMA3DO95025 777 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 PGLSO95336 258 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 OR2B6P58173 313 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 EMX1Q04741 257 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 TRAP1Q12931 704 aaKnown RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 PID1Q7Z2X4 250 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 THAP5Q7Z6K1 395 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 METTL4Q8N3J2 472 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 C3orf30Q96M34 536 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 NODALQ96S42 347 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 ERVK-18Q9QC07 812 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 ACADSBP45954 432 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 KRT6CP48668 564 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 STK11Q15831 433 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 TAZQ16635 292 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 AASDHQ4L235 1098 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 GALNT5Q7Z7M9 940 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 PROX1Q92786 737 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 NEDD4LQ96PU5 975 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 SLC30A3Q99726 388 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 FRMD8P1Q9BZ68 369 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-229ENST00000488765 CD320Q9NPF0 282 aa16.16■□□□□ 0.18
MCF2L-229ENST00000488765 A0A0J9YYE9 177 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 UPK1BO75841 260 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 PGAM1P18669 254 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 C8orf59Q8N0T1 100 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TTC30BQ8N4P2 665 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 C12orf29Q8N999 325 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TXNDC5Q8NBS9 432 aaKnown RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 OR13J1Q8NGT2 312 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TRPM4Q8TD43 1214 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 HEXIM2Q96MH2 286 aaKnown RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 GGA3Q9NZ52 723 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 UTS2RQ9UKP6 389 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 SLC12A8A0AV02 714 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 RFC2P35250 354 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 YWHAEP62258 255 aaKnown RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 ADARB1P78563 741 aaKnown RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TAP1Q03518 808 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 CD47Q08722 323 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 GLRX5Q86SX6 157 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 DENND6AQ8IWF6 608 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 AGBL3Q8NEM8 1001 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 RHOXF1Q8NHV9 184 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 PCNPQ8WW12 178 aaKnown RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 JPH3Q8WXH2 748 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 ASPSCR1Q9BZE9 553 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 ERVK13-1Q9NX77 482 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 DNMT3AQ9Y6K1 912 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 K7ERI5 159 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TSC22D2O75157 780 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 CYBBP04839 570 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 ATF4P18848 351 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-229ENST00000488765 UQCRC1P31930 480 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 PPP5CP53041 499 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 CD83Q01151 205 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 FAM83EQ2M2I3 478 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 ZNF699Q32M78 642 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 C6orf141Q5SZD1 244 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TMEM151AQ8N4L1 468 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 MYRFLQ96LU7 910 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 TMLHEQ9NVH6 421 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 QPCTLQ9NXS2 382 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 COL4A5P29400 1685 aa16.15■□□□□ 0.18
MCF2L-229ENST00000488765 A0A0G2JMP0 313 aa16.14■□□□□ 0.17
MCF2L-229ENST00000488765 GFAPP14136 432 aa16.14■□□□□ 0.17
MCF2L-229ENST00000488765 GPD1P21695 349 aa16.14■□□□□ 0.17
MCF2L-229ENST00000488765 EIF2DP41214 584 aaKnown RBP16.14■□□□□ 0.17
MCF2L-229ENST00000488765 ARCN1P48444 511 aaKnown RBP16.14■□□□□ 0.17
MCF2L-229ENST00000488765 LIMK2P53671 638 aa16.14■□□□□ 0.17
MCF2L-229ENST00000488765 CNTN2Q02246 1040 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms