RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GGT5P36269 586 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 CPOXP36551 454 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 GAS1P54826 345 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 GOLGA8DPQ0D2H9 430 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 NFATC4Q14934 902 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 RNPS1Q15287 305 aaKnown RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 IZUMO4Q1ZYL8 232 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 KRT24Q2M2I5 525 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 SOWAHAQ2M3V2 549 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF585BQ52M93 769 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 TXNDC8Q6A555 127 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF324BQ6AW86 544 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 CDC42BPGQ6DT37 1551 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 SLC46A3Q7Z3Q1 461 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ZC3HC1Q86WB0 502 aaKnown RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 DSELQ8IZU8 1212 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 PLD5Q8N7P1 536 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 NEK9Q8TD19 979 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 GPT2Q8TD30 523 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ADAMTS15Q8TE58 950 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 SMARCE1Q969G3 411 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ZBTB10Q96DT7 871 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 FAM84BQ96KN1 310 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 HARBI1Q96MB7 349 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 PPM1MQ96MI6 270 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 SLITRK1Q96PX8 696 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 PAIP1Q9H074 479 aaKnown RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 SLCO5A1Q9H2Y9 848 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 CISD1Q9NZ45 108 aaKnown RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF580Q9UK33 172 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ERVK-11Q9UQG0 969 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 PCDHGB1Q9Y5G3 927 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 KCPQ6ZWJ8 1503 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 CCNB3Q8WWL7 1395 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 PLEKHG2Q9H7P9 1386 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 KIF15Q9NS87 1388 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 SBF1O95248 1867 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 A6NLC8 198 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 C4orf47A7E2U8 309 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 AKR1B15C9JRZ8 316 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 TAF4O00268 1085 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 SEC14L2O76054 403 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 F9P00740 461 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 GNAQP50148 359 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 RARSP54136 660 aaKnown RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 CLDN2P57739 230 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 PTP4A2Q12974 167 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 KIF19Q2TAC6 998 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 XKR9Q5GH70 373 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 RUSC1-AS1Q66K80 236 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 ACAD10Q6JQN1 1059 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 METTL2BQ6P1Q9 378 aaKnown RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 IL17REQ8NFR9 667 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 TMED6Q8WW62 240 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 WASF1Q92558 559 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 FAM149B1Q96BN6 582 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 METTL2AQ96IZ6 378 aaKnown RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF385AQ96PM9 386 aaKnown RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 FIZ1Q96SL8 496 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 MPHOSPH8Q99549 860 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 NAP1L4Q99733 375 aaKnown RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 KXD1Q9BQD3 176 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 IFIH1Q9BYX4 1025 aaKnown RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 C17orf75Q9HAS0 396 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 MAGEE1Q9HCI5 957 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 PREBQ9HCU5 417 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 GGA3Q9NZ52 723 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 NFE2L3Q9Y4A8 694 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 SCINQ9Y6U3 715 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF644Q9H582 1327 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-214ENST00000488427 KNDC1Q76NI1 1749 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 FMN2Q9NZ56 1722 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 CRYBG1Q9Y4K1 1723 aa4.41□□□□□ -1.7
ITGB1-214ENST00000488427 CNTNAP1P78357 1384 aa4.4□□□□□ -1.7
ITGB1-214ENST00000488427 LRRC37A3O60309 1634 aa4.4□□□□□ -1.7
ITGB1-214ENST00000488427 WNK3Q9BYP7 1800 aa4.4□□□□□ -1.7
ITGB1-214ENST00000488427 PLSCR5A0PG75 271 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 CCDC189A1A4V9 331 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 CLEC18AA5D8T8 446 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 GOLGA6L9A6NEM1 432 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 TIMM23O14925 209 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 SLC16A5O15375 505 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 CCNDBP1O95273 360 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 AGAP20933 346 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 ABCD3P28288 659 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 DDIT3P35638 169 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 CCNG2Q16589 344 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 PRICKLE4Q2TBC4 344 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 AMZ1Q400G9 498 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 ATP13A5Q4VNC0 1218 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 JAKMIP3Q5VZ66 844 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 ATF7IPQ6VMQ6 1270 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 CLEC18CQ8NCF0 446 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 ARRDC2Q8TBH0 407 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 IGSF21Q96ID5 467 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 ADGRG7Q96K78 797 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 SLC26A6Q9BXS9 759 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms