RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 PQLC3Q8N755 202 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 CCNYQ8ND76 341 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 DNAJC7Q99615 494 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 ABCG8Q9H221 673 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 TAAR2Q9P1P5 351 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 DNPEPQ9ULA0 475 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 ATXN7L1Q9ULK2 861 aaPredicted RBP22.53■■□□□ 1.2
PTPN4-211ENST00000488279 LRP4O75096 1905 aa22.53■■□□□ 1.2
PTPN4-211ENST00000488279 SSU72P8A0A1W2PR75 194 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 ZW10O43264 779 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 PYGLP06737 847 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 IVLP07476 585 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 TMEM253P0C7T8 217 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 JMJD7P0C870 316 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 GBE1Q04446 702 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 ZFP36L1Q07352 338 aaKnown RBP22.52■■□□□ 1.2
PTPN4-211ENST00000488279 IHHQ14623 411 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 MESDQ14696 234 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 ADAMTSL4Q6UY14 1074 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 NRSN1Q8IZ57 195 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 ARRDC2Q8TBH0 407 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 LRRN4Q8WUT4 740 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 RAPGEF5Q92565 580 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 TMEM159Q96B96 161 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 SMIM14Q96QK8 99 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 TDRD1Q9BXT4 1180 aaKnown RBP22.52■■□□□ 1.2
PTPN4-211ENST00000488279 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.52■■□□□ 1.2
PTPN4-211ENST00000488279 SSUH2Q9Y2M2 353 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 PCDHGA7Q9Y5G6 932 aa22.52■■□□□ 1.2
PTPN4-211ENST00000488279 RHPN2P1A8MT19 583 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 TPM1P09493 284 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 KDELR1P24390 212 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 AK4P27144 223 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 ADCY8P40145 1251 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 RPL26P61254 145 aaKnown RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 B4GALNT1Q00973 533 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 CTBSQ01459 385 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 VAC14Q08AM6 782 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 C19orf57Q0VDD7 668 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 SLC10A2Q12908 348 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 BIRC2Q13490 618 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 SKOR2Q2VWA4 1001 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 DOK6Q6PKX4 331 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 SLC30A9Q6PML9 568 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 ZNF765Q7L2R6 523 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 C17orf82Q86X59 251 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 CCDC13Q8IYE1 715 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 SLC35G2Q8TBE7 412 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 PTCD2Q8WV60 388 aaKnown RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 SCAMP4Q969E2 229 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 HDAC11Q96DB2 347 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 ZNF830Q96NB3 372 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 RNF157Q96PX1 679 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 PCDH9Q9HC56 1237 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 DTLQ9NZJ0 730 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 RPL26L1Q9UNX3 145 aaKnown RBP22.51■■□□□ 1.19
PTPN4-211ENST00000488279 TMEM98Q9Y2Y6 226 aa22.51■■□□□ 1.19
PTPN4-211ENST00000488279 CAPN8A6NHC0 703 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 ERVH48-1M5A8F1 160 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 ECEL1O95672 775 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 SOD1P00441 154 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 PRLP01236 227 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 PRB1P04280 392 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 HLA-DQB2P05538 268 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 HGFP14210 728 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 ALDH4A1P30038 563 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 SLC5A2P31639 672 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 STC1P52823 247 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 MAZP56270 477 aaKnown RBP22.5■■□□□ 1.19
PTPN4-211ENST00000488279 RHDQ02161 417 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 NIPAL4Q0D2K0 466 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 PIM3Q86V86 326 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 JAMLQ86YT9 394 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 RAVER1Q8IY67 606 aaKnown RBP22.5■■□□□ 1.19
PTPN4-211ENST00000488279 EXD1Q8NHP7 514 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 SCARF2Q96GP6 870 aaPredicted RBP22.5■■□□□ 1.19
PTPN4-211ENST00000488279 CMKLR1Q99788 373 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 MAK16Q9BXY0 300 aaKnown RBP22.5■■□□□ 1.19
PTPN4-211ENST00000488279 CDH19Q9H159 772 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 LOXL2Q9Y4K0 774 aa22.5■■□□□ 1.19
PTPN4-211ENST00000488279 SHROOM3Q8TF72 1996 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 B4GAT1O43505 415 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 CLDN7O95471 211 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 JCHAINP01591 159 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 ARHGAP25P42331 645 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 OR1D5P58170 312 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 CLN3Q13286 438 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 AMZ1Q400G9 498 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 ZNF438Q7Z4V0 828 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 LPCAT1Q8NF37 534 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 SNRNP27Q8WVK2 155 aaKnown RBP22.49■■□□□ 1.19
PTPN4-211ENST00000488279 CCDC42Q96M95 316 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 RIOK2Q9BVS4 552 aaKnown RBP22.49■■□□□ 1.19
PTPN4-211ENST00000488279 PISDQ9UG56 409 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 ST14Q9Y5Y6 855 aa22.49■■□□□ 1.19
PTPN4-211ENST00000488279 LRRD1A4D1F6 860 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 CPNE6O95741 557 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 ACTR1BP42025 376 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 GPR3P46089 330 aa22.48■■□□□ 1.19
PTPN4-211ENST00000488279 ACTR1AP61163 376 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms