RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SLC22A2O15244 555 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 TBX10O75333 385 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 LAG3P18627 525 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 DNAJB1P25685 340 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 CHN2P52757 468 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 BNIP2Q12982 314 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 SIRPB2Q5JXA9 342 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 C14orf80Q86SX3 495 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 MAB21L3Q8N8X9 362 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 OR13C4Q8NGS5 318 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 OR52B2Q96RD2 323 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 SEZ6LQ9BYH1 1024 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 KIAA1522Q9P206 1035 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 ANAPC2Q9UJX6 822 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 ARL5AQ9Y689 179 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 MGAT4DA6NG13 374 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 C5orf58C9J3I9 102 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 LIN7AO14910 233 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 CNTN5O94779 1100 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 POLR2EP19388 210 aaKnown RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 ACVRL1P37023 503 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 RFTN1Q14699 578 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 SELENOMQ8WWX9 145 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 ZFRQ96KR1 1074 aaKnown RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 C1orf74Q96LT6 269 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 COPS8Q99627 209 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 INTS10Q9NVR2 710 aaKnown RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 UBXN8O00124 270 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 HAS3O00219 553 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 FFAR3O14843 346 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 GPR42O15529 346 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 XYLBO75191 536 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ALDH1A2O94788 518 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SERPIND1P05546 499 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ETV4P43268 484 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 CLCQ05315 142 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TMEM198Q66K66 360 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 GRAMD4Q6IC98 578 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 CAMK1DQ8IU85 385 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TRAPPC9Q96Q05 1148 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ZNF510Q9Y2H8 683 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 GNG14A0A1W2PPG7 69 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 CLOCKO15516 846 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 S100A3P33764 101 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 KCNQ1P51787 676 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 RBM20Q5T481 1227 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 GPR141Q7Z602 305 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 HOPXQ9BPY8 73 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 C1orf21Q9H246 121 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 WDR6Q9NNW5 1121 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 CFAP97Q9P2B7 532 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 LIMD1Q9UGP4 676 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 EVLQ9UI08 416 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 FKBPLQ9UIM3 349 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TTC24A2A3L6 582 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 MTMR11A4FU01 709 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 KPNA3O00505 521 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SLC10A3P09131 477 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SPATA31D3P0C874 917 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 DHRS4L1P0CG22 281 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TAF1AQ15573 450 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TIGD2Q4W5G0 525 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SPATA31D4Q6ZUB0 917 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ITFG1Q8TB96 612 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 NMD3Q96D46 503 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SCLYQ96I15 445 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ZCCHC2Q9C0B9 1178 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 MRM3Q9HC36 420 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 NKX1-2Q9UD57 310 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 MYRFQ9Y2G1 1151 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 DYRK1BQ9Y463 629 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TIMM22Q9Y584 194 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 A8MT66 165 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SLC22A3O75751 556 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 CYBAP13498 195 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 UQCRBP14927 111 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 AP1S1P61966 158 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 RPL38P63173 70 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TRAF2Q12933 501 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 TSNQ15631 228 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 ALKAL1Q6UXT8 129 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 WDR60Q8WVS4 1066 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 GFM2Q969S9 779 aaKnown RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 SLC7A6OSQ96CW6 309 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 MED8Q96G25 268 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 UGT2B28Q9BY64 529 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 UNC93B1Q9H1C4 597 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRA2B-214ENST00000487615 DNAJB4Q9UDY4 337 aa11.78□□□□□ -0.52
TRA2B-214ENST00000487615 HNRNPRO43390 633 aaKnown RBP11.77□□□□□ -0.52
TRA2B-214ENST00000487615 CPSF4O95639 269 aaKnown RBP11.77□□□□□ -0.52
TRA2B-214ENST00000487615 ZNF682O95780 498 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms