RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 PCYT1AP49585 367 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 HARS2P49590 506 aaKnown RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 BCAP31P51572 246 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 ATXN1P54253 815 aaKnown RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 GNG2P59768 71 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 UBE2HP62256 183 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 TSPY1Q01534 308 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 KRT17Q04695 432 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 SPAG1Q07617 926 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 CDC16Q13042 620 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 CUL2Q13617 745 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 RAB32Q13637 225 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PPA1Q15181 289 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PTGISQ16647 500 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 TMEM266Q2M3C6 531 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PTCHD3Q3KNS1 767 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 CCDC58Q4VC31 144 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 LIN52Q52LA3 116 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 KRTCAP3Q53RY4 240 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PM20D1Q6GTS8 502 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 C1orf228Q6PIY5 440 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 STOX1Q6ZVD7 989 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 ASPGQ86U10 573 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 DNAAF5Q86Y56 855 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 EPHX4Q8IUS5 362 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 LRRC34Q8IZ02 419 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 LRRC71Q8N4P6 559 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 CSGALNACT2Q8N6G5 542 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 BOLLQ8N9W6 283 aaKnown RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 LHFPL5Q8TAF8 219 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 ADAMTS16Q8TE57 1224 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PYROXD1Q8WU10 500 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 SLC44A1Q8WWI5 657 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 NELFBQ8WX92 580 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 MSANTD3Q96H12 275 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 USP28Q96RU2 1077 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 TESK2Q96S53 571 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 RANBP9Q96S59 729 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 CCT8L2Q96SF2 557 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 YME1L1Q96TA2 773 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PIP5K1AQ99755 562 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 LLPHQ9BRT6 129 aaKnown RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 GHITMQ9H3K2 345 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 THAP9Q9H5L6 903 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 ATP13A3Q9H7F0 1226 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 TMEM206Q9H813 350 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 ANKZF1Q9H8Y5 726 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 PLGRKTQ9HBL7 147 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 SERTAD4Q9NUC0 356 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 ETNK2Q9NVF9 386 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 TBC1D14Q9P2M4 693 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 SLC17A6Q9P2U8 582 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 CD300AQ9UGN4 299 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 AFF4Q9UHB7 1163 aaKnown RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 FAF1Q9UNN5 650 aaPredicted RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 RPL26L1Q9UNX3 145 aaKnown RBP5.51□□□□□ -1.53
COPS3-209ENST00000486810 DTX4Q9Y2E6 619 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 FER1L4A9Z1Z3 1794 aa5.51□□□□□ -1.53
COPS3-209ENST00000486810 TOP2AP11388 1531 aaKnown RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 C15orf38-AP3S2A0A0A6YYH1 394 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ARHGEF37A1IGU5 675 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 FUOMA2VDF0 154 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 CTAGE9A4FU28 777 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 OR6C74A6NCV1 312 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 MBD3L4A6NDZ8 208 aaPredicted RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 MBD3L3A6NE82 208 aaPredicted RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 SMCO2A6NFE2 343 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 F8W8V4 182 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 PYCARD-AS1I3L0S3 204 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 OVOL3O00110 214 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 MASP2O00187 686 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 AREL1O15033 823 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 SLC16A3O15427 465 aaKnown RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 SCO2O43819 266 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ATP5HO75947 161 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 RSL1D1O76021 490 aaKnown RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 URODP06132 367 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ASGR1P07306 291 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 IL6RP08887 468 aaPredicted RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 HOXB8P17481 243 aaPredicted RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 GAP43P17677 238 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ITGAXP20702 1163 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 GSTM2P28161 218 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ACSL1P33121 698 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 HNF4AP41235 474 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 GPD2P43304 727 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 RENBPP51606 427 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ARFIP1P53367 373 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 ASPHQ12797 758 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 BMPR2Q13873 1038 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 COTL1Q14019 142 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 GIT2Q14161 759 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 DOC2AQ14183 400 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 DMC1Q14565 340 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 LY6KQ17RY6 165 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 PARP6Q2NL67 630 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 LRIT3Q3SXY7 679 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 TDRD12Q587J7 1177 aaKnown RBP5.5□□□□□ -1.53
COPS3-209ENST00000486810 TTMPQ5BVD1 217 aa5.5□□□□□ -1.53
COPS3-209ENST00000486810 TREML2Q5T2D2 321 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms