RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MAGEE1Q9HCI5 957 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 ZNF711Q9Y462 761 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 MTF2Q9Y483 593 aaPredicted RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 ZNF106Q9H2Y7 1883 aaKnown RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 LEFTY2O00292 366 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 PGLSO95336 258 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 TPBGLP0DKB5 382 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 FMO4P31512 558 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 CTNNB1P35222 781 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 CSNK1DP48730 415 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 PLK1P53350 603 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 RPL26P61254 145 aaKnown RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 SULT2A1Q06520 285 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 LMAN2Q12907 356 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 PDCD2Q16342 344 aaPredicted RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 PREPLQ4J6C6 727 aaPredicted RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 SWT1Q5T5J6 900 aaKnown RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 SPPL3Q8TCT6 385 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 PHF21BQ96EK2 531 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 FAM161BQ96MY7 647 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 TM6SF2Q9BZW4 377 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 TFB2MQ9H5Q4 396 aaKnown RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 ARHGAP26Q9UNA1 814 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 PKP3Q9Y446 797 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 SCN8AQ9UQD0 1980 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 HIDE1A8MVS5 230 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 MEI4A8MW99 385 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 K7ERQ8 282 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 CYBBP04839 570 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 HNRNPLP14866 589 aaKnown RBP eCLIP20.29■□□□□ 0.84
HPS3-206ENST00000486530 GJA1P17302 382 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 ADSLP30566 484 aaPredicted RBP20.29■□□□□ 0.84
HPS3-206ENST00000486530 SATB1Q01826 763 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 PSAPL1Q6NUJ1 521 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 TPGS1Q6ZTW0 290 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 CUZD1Q86UP6 607 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 ULK2Q8IYT8 1036 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 CFAP61Q8NHU2 1237 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 MAELQ96JY0 434 aaKnown RBP20.29■□□□□ 0.84
HPS3-206ENST00000486530 DERL2Q9GZP9 239 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 DCLRE1BQ9H816 532 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 EBF2Q9HAK2 575 aa20.29■□□□□ 0.84
HPS3-206ENST00000486530 CXorf51AA0A1B0GTR3 108 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 LINC01553A4QN01 128 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 CCL16O15467 120 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 CIB2O75838 187 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PYGLP06737 847 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 COX4I1P13073 169 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 CD9P21926 228 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PPARGP37231 505 aaPredicted RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 KCNC1P48547 511 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 CLCN4P51793 760 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PEX6Q13608 980 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 KPNB1Q14974 876 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 PLEKHG6Q3KR16 790 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 ZRANB3Q5FWF4 1079 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 ZNF678Q5SXM1 525 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 CPSF7Q8N684 471 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 PPP1R36Q96LQ0 422 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 THTPAQ9BU02 230 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 OSBPL1AQ9BXW6 950 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 SLC46A2Q9BY10 475 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 GSTO2Q9H4Y5 243 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 BPIFA1Q9NP55 256 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 ABCB8Q9NUT2 735 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PLK2Q9NYY3 685 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 IL17CQ9P0M4 197 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 MED16Q9Y2X0 877 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 TMEM233B4DJY2 109 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 NRG2O14511 850 aaPredicted RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 SMAD6O43541 496 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 SOCS5O75159 536 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 JUNP05412 331 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 HMGCLP35914 325 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 ATP6V0D1P61421 351 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 HERVK_113P63132 956 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 RAD51Q06609 339 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 BCL2L1Q07817 233 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PTPRNQ16849 979 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 C6orf163Q5TEZ5 329 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 NET1Q7Z628 596 aaPredicted RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 RAB44Q7Z6P3 723 aaPredicted RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 PIANPQ8IYJ0 282 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 RYBPQ8N488 228 aaPredicted RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 SLC22A17Q8WUG5 538 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 POF1BQ8WVV4 589 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 PIH1D2Q8WWB5 315 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 BIRC8Q96P09 236 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 HTATIP2Q9BUP3 242 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 ERVK-6Q9BXR3 956 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 GPR63Q9BZJ6 419 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 ZNF385DQ9H6B1 395 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 NKX1-2Q9UD57 310 aaPredicted RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 COMMD10Q9Y6G5 202 aa20.28■□□□□ 0.84
HPS3-206ENST00000486530 OAS3Q9Y6K5 1087 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 LAMA2P24043 3122 aaKnown RBP20.28■□□□□ 0.84
HPS3-206ENST00000486530 HTRA2O43464 458 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms