RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 B4GAT1O43505 415 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ECEL1O95672 775 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 CPNE6O95741 557 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 TRBC1P01850 177 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 IVLP07476 585 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ZNF30P17039 623 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ITIH1P19827 911 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ALDH4A1P30038 563 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ADCY8P40145 1251 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 POLD2P49005 469 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 OR1D5P58170 312 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 CTBSQ01459 385 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 PDK2Q15119 407 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
SMC4-216ENST00000485645 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
SMC4-216ENST00000485645 AMZ1Q400G9 498 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 PHF19Q5T6S3 580 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 DOK6Q6PKX4 331 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 TMPRSS9Q7Z410 1059 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMC4-216ENST00000485645 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
SMC4-216ENST00000485645 MAML1Q92585 1016 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ZNF670Q9BS34 389 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 ABCG8Q9H221 673 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 RBM22Q9NW64 420 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMC4-216ENST00000485645 CTTNBP2NLQ9P2B4 639 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 AMACRQ9UHK6 382 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 CD84Q9UIB8 345 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 SCN8AQ9UQD0 1980 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 MAP3K6O95382 1288 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 GYPCP04921 128 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 PYGLP06737 847 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 CCNCP24863 283 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 MAPK10P53779 464 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 DSC2Q02487 901 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 PTSQ03393 145 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 NR1D2Q14995 579 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 KIAA1614Q5VZ46 1190 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 ALG1LQ6GMV1 187 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 ADAMTSL4Q6UY14 1074 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 ZNF765Q7L2R6 523 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 ZNF438Q7Z4V0 828 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 NLRP8Q86W28 1048 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 MAP7D3Q8IWC1 876 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 FATE1Q969F0 183 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 SCARF2Q96GP6 870 aaPredicted RBP17.08■□□□□ 0.32
SMC4-216ENST00000485645 TSGA13Q96PP4 275 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 SMIM14Q96QK8 99 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 CDH19Q9H159 772 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 SEMA6CQ9H3T2 930 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 RDH14Q9HBH5 336 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 AKAP7Q9P0M2 348 aaPredicted RBP17.08■□□□□ 0.32
SMC4-216ENST00000485645 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 DNPEPQ9ULA0 475 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 TTLL3Q9Y4R7 772 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 COL6A6A6NMZ7 2263 aa17.08■□□□□ 0.32
SMC4-216ENST00000485645 PROSCO94903 275 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 SOD1P00441 154 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 H2AFZP0C0S5 128 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 LIPCP11150 499 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 CA4P22748 312 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 CASP14P31944 242 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 ETV5P41161 510 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 ACTR1BP42025 376 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 GPR3P46089 330 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 ACTR1AP61163 376 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 LY6DQ14210 128 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 TGIF1Q15583 401 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 CLPPQ16740 277 aaPredicted RBP17.07■□□□□ 0.32
SMC4-216ENST00000485645 USP53Q70EK8 1073 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 H2AFVQ71UI9 128 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 CPNE8Q86YQ8 564 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 NAGSQ8N159 534 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 PATE1Q8WXA2 126 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 USP7Q93009 1102 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 SCAMP4Q969E2 229 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 OR2M4Q96R27 311 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 TDRD1Q9BXT4 1180 aaKnown RBP17.07■□□□□ 0.32
SMC4-216ENST00000485645 SEPT10Q9P0V9 454 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 CHKBQ9Y259 395 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 TMEM98Q9Y2Y6 226 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 ST14Q9Y5Y6 855 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 CFAP46Q8IYW2 2715 aa17.07■□□□□ 0.32
SMC4-216ENST00000485645 ZNF462Q96JM2 2506 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 PRAMEF33A0A0G2JMD5 474 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 EFSO43281 561 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 PRAMEF10O60809 474 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 KRT7P08729 469 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 PLA2G2AP14555 144 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 MX2P20592 715 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 STC1P52823 247 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 IHHQ14623 411 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 ZFYVE27Q5T4F4 411 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 TMEM164Q5U3C3 297 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms