RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PRCPP42785 496 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 CCR10P46092 362 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 NPY4RP50391 375 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 RAB28P51157 221 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ARSEP51690 589 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 GPR143P51810 404 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 TNIP1Q15025 636 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 E2F5Q15329 346 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 HYAL4Q2M3T9 481 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 LETM2Q2VYF4 491 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ENTPD8Q5MY95 495 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 PRAMEF19Q5SWL8 479 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 FBXO46Q6PJ61 603 aaPredicted RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 SUSD1Q6UWL2 747 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ERN2Q76MJ5 926 aaKnown RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 TAOK1Q7L7X3 1001 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 CAMKMTQ7Z624 323 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 HAPLN4Q86UW8 402 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 CHSY1Q86X52 802 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 CEP57L1Q8IYX8 460 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ADGRF4Q8IZF3 695 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 SLC25A41Q8N5S1 370 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 TSPAN14Q8NG11 270 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 OSR1Q8TAX0 266 aaPredicted RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 SCARB1Q8WTV0 552 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 IGSF8Q969P0 613 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 OTULINQ96BN8 352 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 HDAC11Q96DB2 347 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 EFHD1Q9BUP0 239 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 MMP27Q9H306 513 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 MVB12BQ9H7P6 319 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 CPNE5Q9HCH3 593 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 PNRC2Q9NPJ4 139 aaKnown RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ARPP21Q9UBL0 812 aaPredicted RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 PLEKHB1Q9UF11 243 aaPredicted RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ERVK-11Q9UQG0 969 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 POMT1Q9Y6A1 747 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 TRAV34A0A0B4J273 112 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 MAGEB17A8MXT2 336 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 CCDC188H7C350 402 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 MYZAPP0CAP1 466 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 PRLRP16471 622 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 GPD1P21695 349 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SP100P23497 879 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ATP5F1P24539 256 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 HOXC9P31274 260 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 MC5RP33032 325 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 RFC1P35251 1148 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ZNF81P51508 661 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 POLGP54098 1239 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 TMF1P82094 1093 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SORDQ00796 357 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 FAM27E3Q08E93 113 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ITGADQ13349 1161 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 PPP2R5CQ13362 524 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SOWAHAQ2M3V2 549 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 TMEM198Q66K66 360 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 HIST2H2BCQ6DN03 193 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 HIST2H2BDQ6DRA6 164 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SUMO4Q6EEV6 95 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 DHRS7BQ6IAN0 325 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 CAVIN1Q6NZI2 390 aaKnown RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SHQ1Q6PI26 577 aaKnown RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ZNF813Q6ZN06 617 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 TRILQ7L0X0 811 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 DPPA4Q7L190 304 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 PTF1AQ7RTS3 328 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SFTPA2Q8IWL1 248 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 CCDC170Q8IYT3 715 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 PARP16Q8N5Y8 322 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 PI4KAP1Q8N8J0 262 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 PNLDC1Q8NA58 520 aaKnown RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 OR10S1Q8NGN2 331 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SARAFQ96BY9 339 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ZNF419Q96HQ0 510 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 VCPIP1Q96JH7 1222 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 NUDCD1Q96RS6 583 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 RTN4RQ9BZR6 473 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 DNAI2Q9GZS0 605 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 COPS7BQ9H9Q2 264 aaPredicted RBP4.57□□□□□ -1.68
VPS13A-211ENST00000484581 TRPV4Q9HBA0 871 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SPAG4Q9NPE6 437 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 MTMR10Q9NXD2 777 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 ACAD8Q9UKU7 415 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 RAP2CQ9Y3L5 183 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 CLIC4Q9Y696 253 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 SLC4A4Q9Y6R1 1079 aa4.57□□□□□ -1.68
VPS13A-211ENST00000484581 C1orf226A1L170 272 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 TMEM202A6NGA9 273 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 AKR1B15C9JRZ8 316 aaPredicted RBP4.56□□□□□ -1.68
VPS13A-211ENST00000484581 PROB1E7EW31 1015 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 F8W810 466 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 H3BQ06 376 aaPredicted RBP4.56□□□□□ -1.68
VPS13A-211ENST00000484581 SMIM22K7EJ46 135 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 PSMD14O00487 310 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 HSPB6O14558 160 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 ATP2A1O14983 1001 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 STX6O43752 255 aa4.56□□□□□ -1.68
VPS13A-211ENST00000484581 SYNCRIPO60506 623 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms