RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 LIMK2P53671 638 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 MAZP56270 477 aaKnown RBP8.54□□□□□ -1.04
DDX39B-221ENST00000484566 RNASE9P60153 205 aaKnown RBP8.54□□□□□ -1.04
DDX39B-221ENST00000484566 RHOAP61586 193 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 KRT85P78386 507 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 PLAURQ03405 335 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 PTPN20Q4JDL3 420 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 TMEM52BQ4KMG9 183 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 LINC00114Q6XXX2 140 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 KDELC2Q7Z4H8 507 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 SFTPA2Q8IWL1 248 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 GALNT11Q8NCW6 608 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 OR4D9Q8NGE8 314 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 OR1E3Q8WZA6 343 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 MOCOSQ96EN8 888 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
DDX39B-221ENST00000484566 TBCBQ99426 244 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 MDFIQ99750 246 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 DPYSL5Q9BPU6 564 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 GSDMCQ9BYG8 508 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 TSPYL1Q9H0U9 437 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 TMEM168Q9H0V1 697 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 RBSNQ9H1K0 784 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 FGF22Q9HCT0 170 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 ACP6Q9NPH0 428 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 PRDM8Q9NQV8 689 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
DDX39B-221ENST00000484566 ZNF212Q9UDV6 495 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 KCTD3Q9Y597 815 aa8.54□□□□□ -1.04
DDX39B-221ENST00000484566 A1L4Q6 167 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 PDE2AO00408 941 aaPredicted RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 TNFRSF10CO14798 259 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 B4GAT1O43505 415 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 BUB1O43683 1085 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 RAMP2O60895 175 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 TMCC1O94876 653 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 ZNF202O95125 648 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 TFE3P19532 575 aaPredicted RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 ITIH2P19823 946 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 GNLYP22749 145 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 GPR3P46089 330 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 ILF3Q12906 894 aaKnown RBP eCLIP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 PNOCQ13519 176 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 PEX6Q13608 980 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 NR1D2Q14995 579 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 SLC25A52Q3SY17 297 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 FAM102AQ5T9C2 384 aaPredicted RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 C1QL3Q5VWW1 255 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 ANKS6Q68DC2 871 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 KCTD16Q68DU8 428 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 CAPRIN2Q6IMN6 1127 aaKnown RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 TCTN3Q6NUS6 607 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 RWDD4Q6NW29 188 aaKnown RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 LEKR1Q6ZMV7 388 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 CASKIN2Q8WXE0 1202 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 HMCESQ96FZ2 354 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 GSDMAQ96QA5 445 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 TTYH3Q9C0H2 523 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 MAGEH1Q9H213 219 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 TRIT1Q9H3H1 467 aaKnown RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 RETREG1Q9H6L5 497 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 WDR26Q9H7D7 661 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 MRPL40Q9NQ50 206 aaKnown RBP8.53□□□□□ -1.04
DDX39B-221ENST00000484566 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 DNAI1Q9UI46 699 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 PILRAQ9UKJ1 303 aa8.53□□□□□ -1.04
DDX39B-221ENST00000484566 LOC101059948A0A1B0GTJ6 334 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 PRSS38A1L453 326 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 TMEM202A6NGA9 273 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 WIPF3A6NGB9 483 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 RFPL1O75677 317 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-221ENST00000484566 SMC2O95347 1197 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 CCNB1P14635 433 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 HOXB4P17483 251 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-221ENST00000484566 NR1D1P20393 614 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 MPSTP25325 297 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 CD1CP29017 333 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 KRT9P35527 623 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 MMP12P39900 470 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 PPP1R2P41236 205 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 STAT1P42224 750 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 EIF1AXP47813 144 aaKnown RBP8.52□□□□□ -1.05
DDX39B-221ENST00000484566 LIG3P49916 1009 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 ABHD18Q0P651 414 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 RAPGEF1Q13905 1077 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 GRM3Q14832 879 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 UGP2Q16851 508 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 ATP1A1-AS1Q5TC04 95 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 FOXR2Q6PJQ5 311 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 CEACAM20Q6UY09 585 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 ASB18Q6ZVZ8 466 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 FAM131BQ86XD5 332 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 UNC5BQ8IZJ1 945 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 MMP21Q8N119 569 aa8.52□□□□□ -1.05
DDX39B-221ENST00000484566 WDTC1Q8N5D0 677 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms