RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ARL10Q8N8L6 244 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 LRRC57Q8N9N7 239 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 KYQ8NBH2 561 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CCL4L1Q8NHW4 92 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 KIAA1524Q8TCG1 905 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 MAPK15Q8TD08 544 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 GLMNQ92990 594 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 AP2M1Q96CW1 435 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CALR3Q96L12 384 aaKnown RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 TEKT5Q96M29 485 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 AGAP2Q99490 1192 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 MLPHQ9BV36 600 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 RIOK2Q9BVS4 552 aaKnown RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 FRMD8Q9BZ67 464 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 ABCG4Q9H172 646 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 SUDS3Q9H7L9 328 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 CARS2Q9HA77 564 aaKnown RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 GLOD4Q9HC38 313 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 GULP1Q9UBP9 304 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 PCDHA3Q9Y5H8 950 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 ZFC3H1O60293 1989 aaKnown RBP12.86□□□□□ -0.35
HDAC1-209ENST00000484305 ZZEF1O43149 2961 aa12.86□□□□□ -0.35
HDAC1-209ENST00000484305 ANKRD11Q6UB99 2663 aaPredicted RBP12.85□□□□□ -0.35
HDAC1-209ENST00000484305 GRID2IPA4D2P6 1211 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 RPIAP49247 311 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 COPS2P61201 443 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 ADAMTSL4Q6UY14 1074 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 KIAA1328Q86T90 577 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 TRIM74Q86UV6 250 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 EID2BQ96D98 161 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 WDR24Q96S15 920 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 UBP1Q9NZI7 540 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 DKK4Q9UBT3 224 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 TRIM10Q9UDY6 481 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 TMEM98Q9Y2Y6 226 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 PCDHB1Q9Y5F3 818 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 KIF26BQ2KJY2 2108 aa12.85□□□□□ -0.35
HDAC1-209ENST00000484305 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 MACROD2A1Z1Q3 448 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 APOC4-APOC2K7ER74 178 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 PMPCBO75439 489 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 APOC2P02655 101 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 PIRTP0C851 137 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 NFKB1P19838 968 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 CTNNA2P26232 953 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 GNPDA1P46926 289 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 SPINT3P49223 89 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 CDK18Q07002 472 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 AADACL2Q6P093 401 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 OGFOD3Q6PK18 319 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 DOK6Q6PKX4 331 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 LYSMD3Q7Z3D4 306 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 NRROSQ86YC3 692 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 RAVER1Q8IY67 606 aaKnown RBP12.84□□□□□ -0.35
HDAC1-209ENST00000484305 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 CCHCR1Q8TD31 782 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 GPBAR1Q8TDU6 330 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 HTR3CQ8WXA8 447 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 ALG3Q92685 438 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 NAT6Q93015 286 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 HIC2Q96JB3 615 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 QKIQ96PU8 341 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC1-209ENST00000484305 NRSN2Q9GZP1 204 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 C10orf88Q9H8K7 445 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 RABGEF1Q9UJ41 708 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 SUFUQ9UMX1 484 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 SHOC2Q9UQ13 582 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 SLC17A4Q9Y2C5 497 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 ST14Q9Y5Y6 855 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 URB1O60287 2271 aaKnown RBP12.84□□□□□ -0.35
HDAC1-209ENST00000484305 PKD1L2Q7Z442 2459 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 UNC13CQ8NB66 2214 aa12.84□□□□□ -0.35
HDAC1-209ENST00000484305 HACD1B0YJ81 288 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 B4DGG1 531 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 F5H423 210 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 INPP4BO15327 924 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 MTSS1O43312 755 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 NOBOXO60393 691 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 CSO75390 466 aaKnown RBP12.83□□□□□ -0.36
HDAC1-209ENST00000484305 PYGLP06737 847 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 IVLP07476 585 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 PYGMP11217 842 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 RWDD2BP57060 319 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 RTP5Q14D33 572 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 NOMO1Q15155 1222 aa12.83□□□□□ -0.36
HDAC1-209ENST00000484305 HENMT1Q5T8I9 393 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms