RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TMEM98Q9Y2Y6 226 aa10.83□□□□□ -0.68
SMARCC1-205ENST00000483847 FHOD1Q9Y613 1164 aa10.83□□□□□ -0.68
SMARCC1-205ENST00000483847 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 CDC14CA4D256 554 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 GOLGA6CA6NDK9 693 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 GOLGA6BA6NDN3 693 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 POLR1CO15160 346 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 FGFR1OPO95684 399 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 IVLP07476 585 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 GOLGA6DP0CG33 693 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 TNFAIP3P21580 790 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 MMP8P22894 467 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 ERCC5P28715 1186 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 MAN1A1P33908 653 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 RFC1P35251 1148 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 PMS2P54278 862 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 POLR2LP62875 67 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 MRPL49Q13405 166 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 NFATC2Q13469 925 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 EIF2S3LQ2VIR3 472 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 PRR30Q53SZ7 412 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 Q6ZVL8 140 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 MARK2Q7KZI7 788 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 MAMDC2Q7Z304 686 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 TRIM74Q86UV6 250 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 CBARPQ8N350 705 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 SFRP1Q8N474 314 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 GALNT6Q8NCL4 622 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 SLC30A5Q8TAD4 765 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 EPS8L1Q8TE68 723 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 DTD2Q96FN9 168 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 OR2M4Q96R27 311 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 C11orf70Q9BRQ4 267 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 ULBP3Q9BZM4 244 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 SLC39A8Q9C0K1 460 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 CUEDC1Q9NWM3 386 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 GOLGA6AQ9NYA3 693 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 MAP4K5Q9Y4K4 846 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 PCDHB3Q9Y5E6 796 aa10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 PCYT1BQ9Y5K3 369 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 OAS3Q9Y6K5 1087 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-205ENST00000483847 A0A0U1RQS6 177 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 KATNA1O75449 491 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 PALMO75781 387 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 HEXIM1O94992 359 aaKnown RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 CHRNB2P17787 502 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 LHCGRP22888 699 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 MAPK9P45984 424 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 MTIF2P46199 727 aaKnown RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 PAPOLAP51003 745 aaKnown RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 SCNN1BP51168 640 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 MAP7Q14244 749 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 RAET1GQ6H3X3 334 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 SCYL2Q6P3W7 929 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 ARHGAP36Q6ZRI8 547 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 RFLNAQ6ZTI6 216 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 TICAM1Q8IUC6 712 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 ELOA2Q8IYF1 753 aaPredicted RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 NAA15Q9BXJ9 866 aaKnown RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 CATSPERBQ9H7T0 1116 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 RCOR3Q9P2K3 495 aaPredicted RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 NOCTQ9UK39 431 aaKnown RBP10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 PCDHGC4Q9Y5F7 938 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 POLQO75417 2590 aa10.81□□□□□ -0.68
SMARCC1-205ENST00000483847 APCP25054 2843 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 C2CD3Q4AC94 2353 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 TCP11X1B4DZS4 312 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 CCP110O43303 1012 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 SORBS2O94875 1100 aaKnown RBP10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 SOD1P00441 154 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 CYP1A1P04798 512 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 GPD1P21695 349 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 TNFRSF8P28908 595 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 VIPR1P32241 457 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 HHEXQ03014 270 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 FOXM1Q08050 763 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 PTP4A2Q12974 167 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 PEX6Q13608 980 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 PYCR3Q53H96 274 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 WDR59Q6PJI9 974 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 C6orf15Q6UXA7 325 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 TSPAN33Q86UF1 283 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 TCTN2Q96GX1 697 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 CINPQ9BW66 212 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 TBC1D10AQ9BXI6 508 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 TWSG1Q9GZX9 223 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 GPATCH2LQ9NWQ4 482 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 LUZP4Q9P127 313 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 CD84Q9UIB8 345 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 RWDD2AQ9UIY3 292 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 FZD10Q9ULW2 581 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 PRKAB1Q9Y478 270 aa10.8□□□□□ -0.68
SMARCC1-205ENST00000483847 PIPSLA2A3N6 862 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 NPIPB15A6NHN6 443 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 F8VZ95 297 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 FGF10O15520 208 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 CREG1O75629 220 aa10.79□□□□□ -0.68
SMARCC1-205ENST00000483847 KRT38O76015 456 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms