RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 DET1Q7L5Y6 550 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ARPINQ7Z6K5 226 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ZBTB46Q86UZ6 589 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CPNE9Q8IYJ1 553 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CENPLQ8N0S6 344 aaPredicted RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 AUTS2Q8WXX7 1259 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 LRTOMTQ8WZ04 291 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 HIC2Q96JB3 615 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 KCTD14Q9BQ13 255 aaPredicted RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 ATP11BQ9Y2G3 1177 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 Q9Y3F1 56 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 TTC3P53804 2025 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 C1orf232A0A0U1RR37 186 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 MYOCOSA0A1B0GUC4 107 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ARHGAP10A1A4S6 786 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ACSL4O60488 711 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 AOC2O75106 756 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ATP6V1G1O75348 118 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 PARNO95453 639 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 CKMT2P17540 419 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CCNG1P51959 295 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 NDST2P52849 883 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 HSPA14Q0VDF9 509 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 BOP1Q14137 746 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 RNF19BQ6ZMZ0 732 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ANKS3Q6ZW76 656 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 LRRC8DQ7L1W4 858 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ARHGAP12Q8IWW6 846 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 SIDT2Q8NBJ9 832 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 TRPV1Q8NER1 839 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ANKRD49Q8WVL7 239 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 FIG4Q92562 907 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 C11orf84Q9BUA3 381 aaPredicted RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 TRIM54Q9BYV2 358 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ACTR8Q9H981 624 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ZNFX1Q9P2E3 1918 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 KANSL1LA0AUZ9 987 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 OR6C75A6NL08 312 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 SLC7A4O43246 635 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CYBBP04839 570 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 URODP06132 367 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ITGALP20701 1170 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 KCNA5P22460 613 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 GLDCP23378 1020 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ARHGEF6Q15052 776 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ZIK1Q3SY52 487 aaPredicted RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 PARP15Q460N3 678 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ARMC12Q5T9G4 340 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 MAVSQ7Z434 540 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CILP2Q8IUL8 1156 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 HERC6Q8IVU3 1022 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 OR56A4Q8NGH8 313 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 PTCD2Q8WV60 388 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 MRPS31Q92665 395 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 CDKN2AIPNLQ96HQ2 116 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 RPL10LQ96L21 214 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 NSUN5Q96P11 429 aaKnown RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 HAUS8Q9BT25 410 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 KLQ9UEF7 1012 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 TRIM17Q9Y577 477 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ATP6V1B2P21281 511 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 FASP25445 335 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 GGT5P36269 586 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 BTG3Q14201 252 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 LRRC73Q5JTD7 316 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 IL23RQ5VWK5 629 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 REP15Q6BDI9 236 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 MSANTD2Q6P1R3 559 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ZNF598Q86UK7 904 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 RALGPS2Q86X27 583 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 KBTBD2Q8IY47 623 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CCDC28BQ9BUN5 200 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 EVLQ9UI08 416 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 CDC7O00311 574 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ZNF623O75123 536 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 GJB5O95377 273 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 NCK1P16333 377 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 ARRB2P32121 409 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 YBEYP58557 167 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 CLCQ05315 142 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 BCL2L1Q07817 233 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 IL10RBQ08334 325 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CCNIQ14094 377 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 FAM219BQ5XKK7 198 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 UGT3A1Q6NUS8 523 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 C2CD4AQ8NCU7 369 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 CLHC1Q8NHS4 586 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 MAGEE2Q8TD90 523 aaPredicted RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 BRSK1Q8TDC3 778 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 SNX19Q92543 992 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 GFM2Q969S9 779 aaKnown RBP9.12□□□□□ -0.95
CALD1-220ENST00000482470 NT5C3BQ969T7 300 aa9.12□□□□□ -0.95
CALD1-220ENST00000482470 FAM162AQ96A26 154 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms