RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PSMD11O00231 422 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 INPP4BO15327 924 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 TP73O15350 636 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 LATO43561 262 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 LDB2O43679 373 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 CD27P26842 260 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 NMBRP28336 390 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 NPY2RP49146 381 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 ZNF140P52738 457 aaPredicted RBP13.19□□□□□ -0.3
HDAC1-208ENST00000482310 ARL4CP56559 192 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 PDIA2Q13087 525 aaKnown RBP13.19□□□□□ -0.3
HDAC1-208ENST00000482310 WSCD2Q2TBF2 565 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 DNAJC21Q5F1R6 531 aaKnown RBP13.19□□□□□ -0.3
HDAC1-208ENST00000482310 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 ZDHHC24Q6UX98 284 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 CAPN12Q6ZSI9 719 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 GPR26Q8NDV2 337 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 FBXO25Q8TCJ0 367 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 ZNF669Q96BR6 464 aaPredicted RBP13.19□□□□□ -0.3
HDAC1-208ENST00000482310 SRPK1Q96SB4 655 aaKnown RBP13.19□□□□□ -0.3
HDAC1-208ENST00000482310 C1QTNF2Q9BXJ5 285 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 IL22Q9GZX6 179 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 SMOC1Q9H4F8 434 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 FAM96AQ9H5X1 160 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 SUDS3Q9H7L9 328 aaPredicted RBP13.19□□□□□ -0.3
HDAC1-208ENST00000482310 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 CHRAC1Q9NRG0 131 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 FAM114A2Q9NRY5 505 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 IL17CQ9P0M4 197 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 OR1A2Q9Y585 309 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 POM121BA6NF01 834 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 OR51F1A6NGY5 319 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 SDR42E2A6NKP2 422 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 FPGTO14772 594 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 NDC80O14777 642 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 CFIP05156 583 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 ADRA1DP25100 572 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 HMGCLP35914 325 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 SPAM1P38567 509 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 GPR1P46091 355 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 CARSP49589 748 aaKnown RBP13.18□□□□□ -0.3
HDAC1-208ENST00000482310 STAT4Q14765 748 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
HDAC1-208ENST00000482310 PCID2Q5JVF3 399 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 TSTD2Q5T7W7 516 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
HDAC1-208ENST00000482310 GCNT7Q6ZNI0 430 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 TRIM74Q86UV6 250 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 PDIK1LQ8N165 341 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 OTUD6BQ8N6M0 293 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 ART4Q93070 314 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 ZC3H10Q96K80 434 aaKnown RBP13.18□□□□□ -0.3
HDAC1-208ENST00000482310 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
HDAC1-208ENST00000482310 KLF6Q99612 283 aaPredicted RBP13.18□□□□□ -0.3
HDAC1-208ENST00000482310 ORAI3Q9BRQ5 295 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 PCED1AQ9H1Q7 454 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 FAM83DQ9H4H8 585 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 TM9SF3Q9HD45 589 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 TMEM74BQ9NUR3 256 aa13.18□□□□□ -0.3
HDAC1-208ENST00000482310 GLYATL1P3A0A0U1RQE8 302 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 MROH6A6NGR9 719 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 GOLGA8KD6RF30 607 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 PRAMEF26H0Y7S4 382 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 GOLGA8TH3BQL2 631 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 AP3B1O00203 1094 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 BCAT2O15382 392 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-208ENST00000482310 PRSS56P0CW18 603 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 MLNP12872 115 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 MC4RP32245 332 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 ELK3P41970 407 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 MAGEA3P43357 314 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
HDAC1-208ENST00000482310 ARSDP51689 593 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 PDE1BQ01064 536 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 INPP5AQ14642 412 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 ZRANB3Q5FWF4 1079 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 ZNF648Q5T619 568 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-208ENST00000482310 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 CENPUQ71F23 418 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 IGDCC3Q8IVU1 814 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 ZBED8Q8IZ13 594 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 STYXQ8WUJ0 223 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 CENPTQ96BT3 561 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 MFSD3Q96ES6 412 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 STAMBPL1Q96FJ0 436 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 TBATAQ96M53 351 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 RANBP9Q96S59 729 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 NLE1Q9NVX2 485 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-208ENST00000482310 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 SOX13Q9UN79 622 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 DMTF1Q9Y222 760 aa13.17□□□□□ -0.3
HDAC1-208ENST00000482310 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms