RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ARHGAP26Q9UNA1 814 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 CD3EAPO15446 510 aaKnown RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 COX4I1P13073 169 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 RHOAP61586 193 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 TIAL1Q01085 375 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHD3-211ENST00000481999 CAMK1Q14012 370 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 RBM23Q86U06 439 aaKnown RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 PIANPQ8IYJ0 282 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 C7orf61Q8IZ16 206 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 PHTF2Q8N3S3 785 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 CDKN2AIPNLQ96HQ2 116 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 TSNARE1Q96NA8 513 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 YIPF3Q9GZM5 350 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 ILKAPQ9H0C8 392 aaPredicted RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 MFSD1Q9H3U5 465 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHD3-211ENST00000481999 INTS6Q9UL03 887 aaKnown RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 INSL6Q9Y581 213 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 GOLGA8QA0A0J9YX86 632 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 LOC100653049A0A140TA62 436 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 GOLGA8OA6NCC3 632 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 GOLGA8NF8WBI6 632 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 LEFTY2O00292 366 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 GFRA2O00451 464 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 SLC7A4O43246 635 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 OR1I1O60431 355 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 KRT34O76011 436 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 ADH1AP07327 375 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 EPCAMP16422 314 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 TSPAN8P19075 237 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 ITGAXP20702 1163 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 HK2P52789 917 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 PRKAA2P54646 552 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 SLC12A2P55011 1212 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 LMAN2Q12907 356 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 CUL3Q13618 768 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 ACBD5Q5T8D3 534 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 DHDDSQ86SQ9 333 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 DEFB107AQ8IZN7 70 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 BBS5Q8N3I7 341 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 RYBPQ8N488 228 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 CCNYL1Q8N7R7 359 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 EXT2Q93063 718 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 TCF7L2Q9NQB0 619 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 GALPQ9UBC7 116 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 EVLQ9UI08 416 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 FAM50BQ9Y247 325 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 SH3BP1Q9Y3L3 701 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 SLC4A7Q9Y6M7 1214 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 UBA6A0AVT1 1052 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 ANKRD66B4E2M5 251 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 E9PBE3 544 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 KLHL41O60662 606 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 PAPSS2O95340 614 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 GLUD1P00367 558 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 HNRNPLP14866 589 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD3-211ENST00000481999 ZNF140P52738 457 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 FPGSQ05932 587 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 CDC16Q13042 620 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 KLF10Q13118 480 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 PEX6Q13608 980 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 TEAD2Q15562 447 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 PABPC1LQ4VXU2 614 aaKnown RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 SLC9B1Q4ZJI4 515 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 ARL13AQ5H913 290 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 OR52E8Q6IFG1 317 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 PSAPL1Q6NUJ1 521 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 FRMD7Q6ZUT3 714 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 HJURPQ8NCD3 748 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 STYXQ8WUJ0 223 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 ING5Q8WYH8 240 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 PHF21BQ96EK2 531 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 RTKNQ9BST9 563 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 VCX3BQ9H321 246 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 CERS4Q9HA82 394 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 TNFRSF12AQ9NP84 129 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 POLR3BQ9NW08 1133 aaPredicted RBP14.43□□□□□ -0.1
CHD3-211ENST00000481999 FKBPLQ9UIM3 349 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 FIS1Q9Y3D6 152 aa14.43□□□□□ -0.1
CHD3-211ENST00000481999 NEMP1O14524 444 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 ZBTB14O43829 449 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 EFCAB14O75071 495 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 PDE5AO76074 875 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 GLP2RO95838 553 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 CA5AP35218 305 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 PPP3CCP48454 512 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 CCNIQ14094 377 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 LRRC73Q5JTD7 316 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 ZYG11AQ6WRX3 759 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 FBXW8Q8N3Y1 598 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 OR4L1Q8NH43 312 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 SHKBP1Q8TBC3 707 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 SLC26A7Q8TE54 656 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 PYDC1Q8WXC3 89 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 LINC00597Q9H2U6 94 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 WDR55Q9H6Y2 383 aaPredicted RBP14.42□□□□□ -0.1
CHD3-211ENST00000481999 VWA7Q9Y334 891 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 RAP2CQ9Y3L5 183 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 GRM6O15303 877 aa14.42□□□□□ -0.1
CHD3-211ENST00000481999 RPP40O75818 363 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms