RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DPYSL5Q9BPU6 564 aa12.1□□□□□ -0.47
SQSTM1-207ENST00000481335 XPO4Q9C0E2 1151 aaKnown RBP12.1□□□□□ -0.47
SQSTM1-207ENST00000481335 EPB41L5Q9HCM4 733 aa12.1□□□□□ -0.47
SQSTM1-207ENST00000481335 RBM22Q9NW64 420 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■■□□ 15.8
SQSTM1-207ENST00000481335 LRIT1Q9P2V4 623 aa12.1□□□□□ -0.47
SQSTM1-207ENST00000481335 MOSPD1Q9UJG1 213 aa12.1□□□□□ -0.47
SQSTM1-207ENST00000481335 HELZ2Q9BYK8 2649 aaKnown RBP12.1□□□□□ -0.47
SQSTM1-207ENST00000481335 GCN1Q92616 2671 aaKnown RBP12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 NVLO15381 856 aaKnown RBP12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 CPNE6O95741 557 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 SOD1P00441 154 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 PDHA1P08559 390 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 JMJD7P0C870 316 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 CD82P27701 267 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 UGT1A5P35504 534 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 STC1P52823 247 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 PTSQ03393 145 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 ITKQ08881 620 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 SLC14A2Q15849 920 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 DENND2CQ68D51 928 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 TSPAN33Q86UF1 283 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 SLITRK4Q8IW52 837 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 CCDC13Q8IYE1 715 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 ZDHHC1Q8WTX9 485 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 AP2M1Q96CW1 435 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 NAF1Q96HR8 494 aaKnown RBP12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 AKAP7Q9P0M2 348 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 TAAR2Q9P1P5 351 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 VPS18Q9P253 973 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 ATXN7L1Q9ULK2 861 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 SUFUQ9UMX1 484 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 RNF215Q9Y6U7 377 aa12.09□□□□□ -0.47
SQSTM1-207ENST00000481335 CFAP46Q8IYW2 2715 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 GOLGA6CA6NDK9 693 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 GOLGA6BA6NDN3 693 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 K7ENP7 123 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 HGSO14964 777 aaPredicted RBP12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 AKR1B10O60218 316 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 MTA2O94776 668 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 GOLGA6DP0CG33 693 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 ZFXP17010 805 aaPredicted RBP12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 KDELR1P24390 212 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 GNPDA1P46926 289 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 B4GALNT1Q00973 533 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 PPIDQ08752 370 aaKnown RBP12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 SQSTM1Q13501 440 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 TRA2AQ13595 282 aaKnown RBP eCLIP12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 TCEA2Q15560 299 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 MAP9Q49MG5 647 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 LRRC38Q5VT99 294 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 INO80CQ6PI98 192 aaPredicted RBP12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 PIM3Q86V86 326 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 NRROSQ86YC3 692 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 PQLC3Q8N755 202 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 EXD1Q8NHP7 514 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 CCL4L1Q8NHW4 92 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 ARRDC2Q8TBH0 407 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 COX14Q96I36 57 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 RNF157Q96PX1 679 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 OR2M4Q96R27 311 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 BRD8Q9H0E9 1235 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 ABCG8Q9H221 673 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 RMI1Q9H9A7 625 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 PCDH9Q9HC56 1237 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 ABHD10Q9NUJ1 306 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 GOLGA6AQ9NYA3 693 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 DTLQ9NZJ0 730 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 INTUQ9ULD6 942 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 LOXL2Q9Y4K0 774 aa12.08□□□□□ -0.48
SQSTM1-207ENST00000481335 RHPN2P1A8MT19 583 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 GPR89AB7ZAQ6 455 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 PPP1R12AO14974 1030 aaPredicted RBP12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 PRLP01236 227 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 FGF1P05230 155 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 HLA-DQB2P05538 268 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 GPR89BP0CG08 455 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 LIPCP11150 499 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CTPS1P17812 591 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC5A2P31639 672 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 GJC1P36383 396 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 ADCY8P40145 1251 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC1A1P43005 524 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 FASLGP48023 281 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 TAS2R40P59535 323 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 GPLD1P80108 840 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CTBSQ01459 385 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 DSC2Q02487 901 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 GBE1Q04446 702 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CLN3Q13286 438 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 BIRC2Q13490 618 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 TCEAL1Q15170 157 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 ATP13A4Q4VNC1 1196 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 PYCR3Q53H96 274 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 ZFYVE27Q5T4F4 411 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC9A4Q6AI14 798 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms