RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	NFKB1	P19838	968 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	KEL	P23276	732 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	CTNNA2	P26232	953 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	RPL26	P61254	145 aa	Known RBP	12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	E2F1	Q01094	437 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	DPT	Q07507	201 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	PPP2R5E	Q16537	467 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	BBS12	Q6ZW61	710 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	BZW1	Q7L1Q6	419 aa	Known RBP	12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	LYSMD3	Q7Z3D4	306 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	TAF8	Q7Z7C8	310 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	GKN2	Q86XP6	184 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	ZNF567	Q8N184	647 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	LRRC57	Q8N9N7	239 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	MAPK15	Q8TD08	544 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	ALG3	Q92685	438 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	TADA1	Q96BN2	335 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	EID2B	Q96D98	161 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	TEKT5	Q96M29	485 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	FRMD8	Q9BZ67	464 aa	Predicted RBP	12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	CARS2	Q9HA77	564 aa	Known RBP	12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	KCTD5	Q9NXV2	234 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	PADI4	Q9UM07	663 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	RPL26L1	Q9UNX3	145 aa	Known RBP	12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	SHOC2	Q9UQ13	582 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	CLCA2	Q9UQC9	943 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	CACNA1B	Q00975	2339 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	FREM2	Q5SZK8	3169 aa		12.83	□□□□□ -0.36
ABCF3-215	ENST00000481116	UNC13C	Q8NB66	2214 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116		H7C0C1	242 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	TNFRSF10C	O14798	259 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	SLC4A1	P02730	911 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	PYGM	P11217	842 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	AK4	P27144	223 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	RBL1	P28749	1068 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	GNPDA1	P46926	289 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	ATP5O	P48047	213 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	CDK18	Q07002	472 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	NOMO1	Q15155	1222 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	CDCP2	Q5VXM1	449 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	PID1	Q7Z2X4	250 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	PROSER1	Q86XN7	944 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	NRROS	Q86YC3	692 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	PDCD7	Q8N8D1	485 aa	Known RBP	12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	SCG3	Q8WXD2	468 aa	Known RBP	12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	GLMN	Q92990	594 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	LYSMD1	Q96S90	227 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	ADGRE3	Q9BY15	652 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	ABCG4	Q9H172	646 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	USP29	Q9HBJ7	922 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	RABGEF1	Q9UJ41	708 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	SUFU	Q9UMX1	484 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	PLEKHM1	Q9Y4G2	1056 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	PCDHB1	Q9Y5F3	818 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	ST14	Q9Y5Y6	855 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	ADAMTS20	P59510	1910 aa		12.82	□□□□□ -0.36
ABCF3-215	ENST00000481116	CCDC66	A2RUB6	948 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	FADS2P1	A8MWK0	482 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116		B4DGG1	531 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	APOC4-APOC2	K7ER74	178 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	PDE2A	O00408	941 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	FTCD	O95954	541 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	APOC2	P02655	101 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ATP1A1	P05023	1023 aa	Known RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	GP1BA	P07359	652 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	SPINT3	P49223	89 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	RPIA	P49247	311 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	RWDD2B	P57060	319 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	COPS2	P61201	443 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	OTUD4	Q01804	1114 aa	Known RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	KIF5A	Q12840	1032 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	CCDC181	Q5TID7	509 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	LVRN	Q6Q4G3	990 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ADAMTSL4	Q6UY14	1074 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	MARK2	Q7KZI7	788 aa	Known RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ZNF765	Q7L2R6	523 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	NRSN1	Q8IZ57	195 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ARL10	Q8N8L6	244 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	DCBLD1	Q8N8Z6	715 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	FAM46D	Q8NEK8	389 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ACTL9	Q8TC94	416 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	HTR3C	Q8WXA8	447 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	HIC2	Q96JB3	615 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	CALR3	Q96L12	384 aa	Known RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	CCDC3	Q9BQI4	270 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	OSBPL8	Q9BZF1	889 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	SYNDIG1	Q9H7V2	258 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ARFGAP3	Q9NP61	516 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	EVA1B	Q9NVM1	165 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	NCKIPSD	Q9NZQ3	722 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	AMFR	Q9UKV5	643 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	DNPEP	Q9ULA0	475 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	SPO11	Q9Y5K1	396 aa		12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	OAS3	Q9Y6K5	1087 aa	Known RBP	12.81	□□□□□ -0.36
ABCF3-215	ENST00000481116	ZZEF1	O43149	2961 aa		12.8	□□□□□ -0.36

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