RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 CCNL2Q96S94 520 aaPredicted RBP15.2■□□□□ 0.02
LIMS3-203ENST00000480744 CMKLR1Q99788 373 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 ABCG8Q9H221 673 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 SEMA6CQ9H3T2 930 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 RDH14Q9HBH5 336 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 RBM22Q9NW64 420 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIMS3-203ENST00000480744 TRNAU1APQ9NX07 287 aaKnown RBP15.2■□□□□ 0.02
LIMS3-203ENST00000480744 CHKBQ9Y259 395 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 SSUH2Q9Y2M2 353 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 TMEM98Q9Y2Y6 226 aa15.2■□□□□ 0.02
LIMS3-203ENST00000480744 MATN3O15232 486 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 B4GAT1O43505 415 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 GYPCP04921 128 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 IVLP07476 585 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 TEAD1P28347 426 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 CASP14P31944 242 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ADCY8P40145 1251 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ETV5P41161 510 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ACTR1BP42025 376 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ARSEP51690 589 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ACTR1AP61163 376 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 B4GALNT1Q00973 533 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ZFP36L1Q07352 338 aaKnown RBP15.19■□□□□ 0.02
LIMS3-203ENST00000480744 PAFAH1B3Q15102 231 aaKnown RBP15.19■□□□□ 0.02
LIMS3-203ENST00000480744 TGIF1Q15583 401 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 IFI16Q16666 785 aaKnown RBP15.19■□□□□ 0.02
LIMS3-203ENST00000480744 ANKRD20A8PQ5CZ79 823 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 USP53Q70EK8 1073 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 MARK2Q7KZI7 788 aaKnown RBP15.19■□□□□ 0.02
LIMS3-203ENST00000480744 PIM3Q86V86 326 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 TTC9Q92623 222 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 SCAMP4Q969E2 229 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 TMEM159Q96B96 161 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 OR2M4Q96R27 311 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 CDH19Q9H159 772 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 HAUS2Q9NVX0 235 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 SLC17A4Q9Y2C5 497 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 PPIL1Q9Y3C6 166 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 PLEKHM1Q9Y4G2 1056 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 COL6A6A6NMZ7 2263 aa15.19■□□□□ 0.02
LIMS3-203ENST00000480744 HELZ2Q9BYK8 2649 aaKnown RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PRAMEF33A0A0G2JMD5 474 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 A0A0J9YYE9 177 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 INPP4BO15327 924 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ZW10O43264 779 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 FZD6O60353 706 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PRAMEF10O60809 474 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PROSCO94903 275 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ZIC2O95409 532 aaPredicted RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 CPNE6O95741 557 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 SOD1P00441 154 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 TRBC1P01850 177 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF30P17039 623 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 CA4P22748 312 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PPM1FP49593 454 aaPredicted RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 TAS2R40P59535 323 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PTSQ03393 145 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 DPTQ07507 201 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PEX6Q13608 980 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 PDK2Q15119 407 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ADAMTSL4Q6UY14 1074 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 SLITRK4Q8IW52 837 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 MAP7D3Q8IWC1 876 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 LPCAT1Q8NF37 534 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 SNRNP27Q8WVK2 155 aaKnown RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 CTNNBL1Q8WYA6 563 aaPredicted RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 MAML1Q92585 1016 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 USP7Q93009 1102 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 WBP1Q96G27 269 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 AGAP2Q99490 1192 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 NUDT22Q9BRQ3 303 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF670Q9BS34 389 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 TDRD1Q9BXT4 1180 aaKnown RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ZMYND15Q9H091 742 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 AKAP7Q9P0M2 348 aaPredicted RBP15.18■□□□□ 0.02
LIMS3-203ENST00000480744 ST14Q9Y5Y6 855 aa15.18■□□□□ 0.02
LIMS3-203ENST00000480744 CAPN8A6NHC0 703 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 NVLO15381 856 aaKnown RBP15.17■□□□□ 0.02
LIMS3-203ENST00000480744 ASMTLO95671 621 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 HLA-DQB2P05538 268 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 KRT7P08729 469 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 LIPCP11150 499 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 PLA2G2AP14555 144 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 CES1P23141 567 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 CCNCP24863 283 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 STC1P52823 247 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 GBE1Q04446 702 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 SRSF6Q13247 344 aaKnown RBP15.17■□□□□ 0.02
LIMS3-203ENST00000480744 IHHQ14623 411 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 C16orf72Q14CZ0 275 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF438Q7Z4V0 828 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 C17orf82Q86X59 251 aaPredicted RBP15.17■□□□□ 0.02
LIMS3-203ENST00000480744 ZFAND4Q86XD8 727 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 GALNT13Q8IUC8 556 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 NAGSQ8N159 534 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 CCNYQ8ND76 341 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms