RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 LMNTD2Q8IXW0 634 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3Q8IZP1 549 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 MREGQ8N565 214 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 GPR26Q8NDV2 337 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 SCG3Q8WXD2 468 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 RLN3Q8WXF3 142 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 NUS1Q96E22 293 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 CDKN2AIPNLQ96HQ2 116 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 NINJ2Q9NZG7 142 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 MBD1Q9UIS9 605 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 IGLON5A6NGN9 336 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 AGAP14A8MT82 685 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 A8MX80 341 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 BUD23O43709 281 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 LZTS3O60299 673 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 SLC4A1P02730 911 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 PYGLP06737 847 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 CNR2P34972 360 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 FNTBP49356 437 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 ARSDP51689 593 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 PEX6Q13608 980 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 FGL2Q14314 439 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 ANGPT1Q15389 498 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 SETMARQ53H47 684 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 AFTPHQ6ULP2 937 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 TRAM1L1Q8N609 369 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 TP53I13Q8NBR0 393 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZBTB44Q8NCP5 570 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 HNRNPLLQ8WVV9 542 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 GAB3Q8WWW8 586 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 C9orf72Q96LT7 481 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 LENG8Q96PV6 779 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZSCAN5AQ9BUG6 496 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 GPR174Q9BXC1 333 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 SLC17A9Q9BYT1 436 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 ABCG8Q9H221 673 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 LRRC4CQ9HCJ2 640 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 IL26Q9NPH9 171 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZSCAN32Q9NX65 697 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 MOCS1Q9NZB8 636 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 COQ6Q9Y2Z9 468 aa12.5□□□□□ -0.41
TRAPPC12-218ENST00000479897 THADAQ6YHU6 1953 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 TRBV5-4A0A0C4DH59 114 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 GLYATL1P3A0A0U1RQE8 302 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 NDUFS2O75306 463 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PRAMEF1O95521 474 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 FOXN2P32314 431 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 STX2P32856 288 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PHBP35232 272 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PMS2P54278 862 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 GPX6P59796 221 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PRAMEP78395 509 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 ITGA9Q13797 1035 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PTPRCAPQ14761 206 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 LONRF1Q17RB8 773 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 HP1BP3Q5SSJ5 553 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PALM2Q8IXS6 379 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 FRMD1Q8N878 549 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 FOXJ1Q92949 421 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 HDAC10Q969S8 669 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 CERS2Q96G23 380 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBATAQ96M53 351 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 VPS35Q96QK1 796 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 KLF6Q99612 283 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 DUSP15Q9H1R2 295 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 EPB41L4BQ9H329 900 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 SEMA4AQ9H3S1 761 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM83DQ9H4H8 585 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 PCDHGA2Q9Y5H1 932 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 ABCA7Q8IZY2 2146 aa12.49□□□□□ -0.41
TRAPPC12-218ENST00000479897 TCRBV9S1A1TA0A576 114 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CCDC78A2IDD5 438 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 CCDC162PA2VCL2 907 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 PRR23AA6NEV1 266 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 METTL12A8MUP2 240 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 RIPK2O43353 540 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 LILRB5O75023 590 aa12.48□□□□□ -0.41
TRAPPC12-218ENST00000479897 SRP72O76094 671 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms