RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 INPP4BO15327 924 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 MAP3K6O95382 1288 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 CALB1P05937 261 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 CYP2A6P11509 494 aaPredicted RBP16.02■□□□□ 0.16
DDX56-210ENST00000479440 ETV3P41162 512 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 HHEXQ03014 270 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 MIIPQ5JXC2 388 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 WDR59Q6PJI9 974 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 SFRP1Q8N474 314 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 C3orf20Q8ND61 904 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 PTCD2Q8WV60 388 aaKnown RBP16.02■□□□□ 0.16
DDX56-210ENST00000479440 SPOCK2Q92563 424 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 TUBGCP2Q9BSJ2 902 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 APMAPQ9HDC9 416 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 CUEDC1Q9NWM3 386 aaPredicted RBP16.02■□□□□ 0.16
DDX56-210ENST00000479440 ADAM22Q9P0K1 906 aa16.02■□□□□ 0.16
DDX56-210ENST00000479440 MRPS18BQ9Y676 258 aaKnown RBP16.02■□□□□ 0.16
DDX56-210ENST00000479440 ARHGEF17Q96PE2 2063 aaPredicted RBP16.01■□□□□ 0.15
DDX56-210ENST00000479440 GFPT2O94808 682 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 GNLYP22749 145 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 DLSTP36957 453 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 GPR1P46091 355 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 POLD2P49005 469 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
DDX56-210ENST00000479440 EPHA4P54764 986 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.01■□□□□ 0.15
DDX56-210ENST00000479440 GALNT13Q8IUC8 556 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 LZTR1Q8N653 840 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 PDCD6IPQ8WUM4 868 aaKnown RBP16.01■□□□□ 0.15
DDX56-210ENST00000479440 NCSTNQ92542 709 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 SH3KBP1Q96B97 665 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 SCARF2Q96GP6 870 aaPredicted RBP16.01■□□□□ 0.15
DDX56-210ENST00000479440 ULBP3Q9BZM4 244 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 SLC39A8Q9C0K1 460 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 EPB41L1Q9H4G0 881 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 MYO9AB2RTY4 2548 aa16.01■□□□□ 0.15
DDX56-210ENST00000479440 TTLL8A6PVC2 850 aa16■□□□□ 0.15
DDX56-210ENST00000479440 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
DDX56-210ENST00000479440 HTRA2O43464 458 aaPredicted RBP16■□□□□ 0.15
DDX56-210ENST00000479440 SLC2A4P14672 509 aa16■□□□□ 0.15
DDX56-210ENST00000479440 LHCGRP22888 699 aa16■□□□□ 0.15
DDX56-210ENST00000479440 PMS2P54278 862 aa16■□□□□ 0.15
DDX56-210ENST00000479440 DPTQ07507 201 aa16■□□□□ 0.15
DDX56-210ENST00000479440 IL10RBQ08334 325 aa16■□□□□ 0.15
DDX56-210ENST00000479440 PTP4A2Q12974 167 aa16■□□□□ 0.15
DDX56-210ENST00000479440 ZNF235Q14590 738 aa16■□□□□ 0.15
DDX56-210ENST00000479440 DNAJC24Q6P3W2 148 aa16■□□□□ 0.15
DDX56-210ENST00000479440 USP45Q70EL2 814 aa16■□□□□ 0.15
DDX56-210ENST00000479440 HSD11B1LQ7Z5J1 315 aa16■□□□□ 0.15
DDX56-210ENST00000479440 CPT1CQ8TCG5 803 aa16■□□□□ 0.15
DDX56-210ENST00000479440 MCEEQ96PE7 176 aa16■□□□□ 0.15
DDX56-210ENST00000479440 PSKH2Q96QS6 385 aa16■□□□□ 0.15
DDX56-210ENST00000479440 SARS2Q9NP81 518 aaKnown RBP16■□□□□ 0.15
DDX56-210ENST00000479440 KIAA1468Q9P260 1216 aa16■□□□□ 0.15
DDX56-210ENST00000479440 KLHL3Q9UH77 587 aa16■□□□□ 0.15
DDX56-210ENST00000479440 DACH1Q9UI36 760 aa16■□□□□ 0.15
DDX56-210ENST00000479440 KCND3Q9UK17 655 aa16■□□□□ 0.15
DDX56-210ENST00000479440 CROTQ9UKG9 612 aa16■□□□□ 0.15
DDX56-210ENST00000479440 AP4E1Q9UPM8 1137 aa16■□□□□ 0.15
DDX56-210ENST00000479440 SIGLEC16A6NMB1 481 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 EIF3CLB5ME19 914 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 K7EM74 188 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 DFFAO00273 331 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 PYGLP06737 847 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 ANKRD34CP0C6C1 535 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 UNGP13051 313 aaPredicted RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 HSPA9P38646 679 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 MAPK9P45984 424 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 NFATC2Q13469 925 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 ERV3-1Q14264 604 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 LBRQ14739 615 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 PYCR3Q53H96 274 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 ADAMTSL4Q6UY14 1074 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 MARK2Q7KZI7 788 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 SLC9B2Q86UD5 537 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 MLKLQ8NB16 471 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 STAMBPL1Q96FJ0 436 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 EIF3CQ99613 913 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 CNPY3Q9BT09 278 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 SIDT1Q9NXL6 827 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 PHTF1Q9UMS5 762 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 PLEKHM1Q9Y4G2 1056 aa15.99■□□□□ 0.15
DDX56-210ENST00000479440 OAS3Q9Y6K5 1087 aaKnown RBP15.99■□□□□ 0.15
DDX56-210ENST00000479440 MN1Q10571 1320 aaPredicted RBP15.98■□□□□ 0.15
DDX56-210ENST00000479440 TRBV23OR9-2A0A075B6M9 112 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 NPIPB15A6NHN6 443 aaPredicted RBP15.98■□□□□ 0.15
DDX56-210ENST00000479440 DAPK3O43293 454 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 CHRNB2P17787 502 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 F8A1P23610 371 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 FOXM1Q08050 763 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 SYCP1Q15431 976 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 C6orf15Q6UXA7 325 aaPredicted RBP15.98■□□□□ 0.15
DDX56-210ENST00000479440 Q6ZVL8 140 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 PHF13Q86YI8 300 aaPredicted RBP15.98■□□□□ 0.15
DDX56-210ENST00000479440 PLXDC1Q8IUK5 500 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 ARHGAP12Q8IWW6 846 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 AVL9Q8NBF6 648 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 ZNF599Q96NL3 588 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms