RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ZFP36L1Q07352 338 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 TRA2AQ13595 282 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 NR1D2Q14995 579 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 PAFAH1B3Q15102 231 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 ALG1LQ6GMV1 187 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 DOK6Q6PKX4 331 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 SLC30A9Q6PML9 568 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 ZNF438Q7Z4V0 828 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 NLRP8Q86W28 1048 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 GALNT13Q8IUC8 556 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 NRSN1Q8IZ57 195 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 AVL9Q8NBF6 648 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 EXD1Q8NHP7 514 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 FAM71BQ8TC56 605 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 FUCA2Q9BTY2 467 aa14.4□□□□□ -0.1
SMARCE1-209ENST00000478349 A0A0J9YYE9 177 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 C1QL1O75973 258 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 PROSCO94903 275 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 TRBC1P01850 177 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 CTPS1P17812 591 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 MAN1A1P33908 653 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 ACTR1BP42025 376 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 PPM1FP49593 454 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 ACTR1AP61163 376 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 GPLD1P80108 840 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 DPYSL3Q14195 570 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 AMZ1Q400G9 498 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 KCTD16Q68DU8 428 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 NCBP2-AS2Q69YL0 99 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 USP53Q70EK8 1073 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 TECPR1Q7Z6L1 1165 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 C17orf82Q86X59 251 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 SLITRK4Q8IW52 837 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 CBARPQ8N350 705 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 ZNF843Q8N446 348 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 CCL4L1Q8NHW4 92 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 CCHCR1Q8TD31 782 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 PIH1D2Q8WWB5 315 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 MAML1Q92585 1016 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 BTBD6Q96KE9 485 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 TSGA13Q96PP4 275 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 TDRD1Q9BXT4 1180 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 ADGRE3Q9BY15 652 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 RBM22Q9NW64 420 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 VPS18Q9P253 973 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 LOC400499M0QZD8 3231 aa14.39□□□□□ -0.11
SMARCE1-209ENST00000478349 PMS2P1A4D2B8 440 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 RGSL1A5PLK6 1076 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 CBFA2T2O43439 604 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 FZD6O60353 706 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 ECEL1O95672 775 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 GYPCP04921 128 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 FGF1P05230 155 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 HGFP14210 728 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 ADCY8P40145 1251 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 ATP1A2P50993 1020 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 STC1P52823 247 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 MAPK10P53779 464 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 MAZP56270 477 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 CTBSQ01459 385 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 MANEAQ5SRI9 462 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 TSPAN33Q86UF1 283 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 CCNYQ8ND76 341 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 LPCAT1Q8NF37 534 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 TTC9Q92623 222 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 HDAC11Q96DB2 347 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 MED8Q96G25 268 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 SCARF2Q96GP6 870 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 AHCYL2Q96HN2 611 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 PCDH9Q9HC56 1237 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 RAD18Q9NS91 495 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 KCNK4Q9NYG8 393 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 PKD2L2Q9NZM6 624 aa14.38□□□□□ -0.11
SMARCE1-209ENST00000478349 STMND1H3BQB6 276 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 DUX1O43812 170 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 ASMTLO95671 621 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 ITGB2P05107 769 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 SFTPCP11686 197 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 IL4RP24394 825 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 HNRNPH3P31942 346 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 CSTF2P33240 577 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 NOP2P46087 812 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 B4GALNT1Q00973 533 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 DSC2Q02487 901 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 MMRN1Q13201 1228 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 SLC18A3Q16572 532 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 VSIG1Q86XK7 387 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 NRROSQ86YC3 692 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 PELI3Q8N2H9 469 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 AGBL5Q8NDL9 886 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 OR4D9Q8NGE8 314 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 OR10G6Q8NH81 332 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 SH3KBP1Q96B97 665 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms