RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MOSPD1Q9UJG1 213 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 PCDHGA1Q9Y5H4 931 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 SPO11Q9Y5K1 396 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 DGKBQ9Y6T7 804 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 ACACBO00763 2458 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 LY6G6EA0A0G2JKS1 128 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 LOC285095A0A1B0GVY8 99 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 PDE2AO00408 941 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-206ENST00000478214 TPP1O14773 563 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 TNFRSF10CO14798 259 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 YY2O15391 372 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 TNFP01375 233 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 SLC4A1P02730 911 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 CTSEP14091 401 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 CHRNA4P43681 627 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 SPINT3P49223 89 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 DAB2P98082 770 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 MPP3Q13368 585 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 RPS6KA1Q15418 735 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 SEL1L2Q5TEA6 688 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 ITPRIPL1Q6GPH6 555 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 ADAMTSL4Q6UY14 1074 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 NLRP8Q86W28 1048 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 RAVER1Q8IY67 606 aaKnown RBP15.53■□□□□ 0.08
HMGA1-206ENST00000478214 FSTL5Q8N475 847 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-206ENST00000478214 SLC25A41Q8N5S1 370 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 IPMKQ8NFU5 416 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 CCDC110Q8TBZ0 833 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 CCHCR1Q8TD31 782 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 UBE2Q2Q8WVN8 375 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 ALS2CR12Q96Q35 445 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 CYP4F12Q9HCS2 524 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 PKD2L2Q9NZM6 624 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 ZNF711Q9Y462 761 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 U3KQA8 63 aa15.53■□□□□ 0.08
HMGA1-206ENST00000478214 PRSS38A1L453 326 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 RFPL3O75679 317 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 STK10O94804 968 aaKnown RBP15.52■□□□□ 0.08
HMGA1-206ENST00000478214 EPOP01588 193 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 FUCA1P04066 466 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 CEACAM5P06731 702 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 ANXA6P08133 673 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 CKMT1AP12532 417 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 ACP1P24666 158 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 PSMB4P28070 264 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 POLD2P49005 469 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 ELOCQ15369 112 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 SIRPB2Q5JXA9 342 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 HENMT1Q5T8I9 393 aaKnown RBP15.52■□□□□ 0.08
HMGA1-206ENST00000478214 ZCCHC8Q6NZY4 707 aaKnown RBP15.52■□□□□ 0.08
HMGA1-206ENST00000478214 DOK6Q6PKX4 331 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 TRIM74Q86UV6 250 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 FAM181AQ8N9Y4 354 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 SLC35B2Q8TB61 432 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 PTCD2Q8WV60 388 aaKnown RBP15.52■□□□□ 0.08
HMGA1-206ENST00000478214 ATG4AQ8WYN0 398 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 SPATA13Q96N96 652 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 FRMD8Q9BZ67 464 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-206ENST00000478214 GPR63Q9BZJ6 419 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 TMEM168Q9H0V1 697 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 FAM83DQ9H4H8 585 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 SUDS3Q9H7L9 328 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-206ENST00000478214 NEUROG3Q9Y4Z2 214 aa15.52■□□□□ 0.08
HMGA1-206ENST00000478214 GOLGA4Q13439 2230 aaKnown RBP15.52■□□□□ 0.07
HMGA1-206ENST00000478214 RGSL1A5PLK6 1076 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 AURKAO14965 403 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 INPP4BO15327 924 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 TNNT3P45378 269 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-206ENST00000478214 GEMP55040 296 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 CLDN6P56747 220 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 SLC1A5Q15758 541 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 TMC3Q7Z5M5 1100 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 MARCH9Q86YJ5 346 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 SLC13A5Q86YT5 568 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-206ENST00000478214 FAM71DQ8N9W8 422 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 GPR26Q8NDV2 337 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 TRIM58Q8NG06 486 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 CNTNAP3BQ96NU0 1288 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 FICDQ9BVA6 458 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 BOCQ9BWV1 1114 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 TLR10Q9BXR5 811 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 CNTNAP3Q9BZ76 1288 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 CARS2Q9HA77 564 aaKnown RBP15.51■□□□□ 0.07
HMGA1-206ENST00000478214 DOLKQ9UPQ8 538 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 SLC17A4Q9Y2C5 497 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 TMEM98Q9Y2Y6 226 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 MSRB2Q9Y3D2 182 aa15.51■□□□□ 0.07
HMGA1-206ENST00000478214 AKAP13Q12802 2813 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 FAM221BA6H8Z2 402 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 C5orf60A6NFR6 353 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 FADS2P1A8MWK0 482 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 ANXA9O76027 345 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 AGTP01019 485 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 PYGLP06737 847 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 HLA-DPA1P20036 260 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 ILKQ13418 452 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 OLIG2Q13516 323 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 SMAD1Q15797 465 aaKnown RBP15.5■□□□□ 0.07
HMGA1-206ENST00000478214 C6orf132Q5T0Z8 1188 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 ALS2CLQ60I27 953 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms