RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ITGB2P05107 769 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 ITGB6P18564 788 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 GPR3P46089 330 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 PTSQ03393 145 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 SQSTM1Q13501 440 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 NR1I3Q14994 352 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 MANEAQ5SRI9 462 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 ARMC12Q5T9G4 340 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 NIPA2Q8N8Q9 360 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 RCBTB1Q8NDN9 531 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 FAM71BQ8TC56 605 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 PMEPA1Q969W9 287 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 BTBD6Q96KE9 485 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
TRIM13-208ENST00000478111 ABCG8Q9H221 673 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 CD84Q9UIB8 345 aa16.65■□□□□ 0.26
TRIM13-208ENST00000478111 GOLGA6CA6NDK9 693 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 GOLGA6BA6NDN3 693 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 HGSO14964 777 aaPredicted RBP16.64■□□□□ 0.25
TRIM13-208ENST00000478111 MBD3O95983 291 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 CD48P09326 243 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 GOLGA6DP0CG33 693 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 FGF3P11487 239 aaPredicted RBP16.64■□□□□ 0.25
TRIM13-208ENST00000478111 NFKBIAP25963 317 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 CD82P27701 267 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 LIMK2P53671 638 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 MMRN1Q13201 1228 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 PIGHQ14442 188 aaPredicted RBP16.64■□□□□ 0.25
TRIM13-208ENST00000478111 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 FIGNQ5HY92 759 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 NKAIN2Q5VXU1 208 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 LRRC66Q68CR7 880 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 XKR5Q6UX68 686 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 ADAMTSL4Q6UY14 1074 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 NLRP8Q86W28 1048 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 BBS5Q8N3I7 341 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 HTR3CQ8WXA8 447 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 SCAMP4Q969E2 229 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 CCDC74BQ96LY2 380 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 AGAP2Q99490 1192 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 SEMA3CQ99985 751 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 NT5MQ9NPB1 228 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 STARD5Q9NSY2 213 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 GOLGA6AQ9NYA3 693 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 TMEM98Q9Y2Y6 226 aa16.64■□□□□ 0.25
TRIM13-208ENST00000478111 IGHV1OR21-1A0A087WYE8 117 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 A0A0J9YYE9 177 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 SLC28A2O43868 658 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 TRBC1P01850 177 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 CSF2RBP32927 897 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 SERPINB6P35237 376 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 GPR1P46091 355 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 ARSEP51690 589 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 CYP4F2P78329 520 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 IQCB1Q15051 598 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 PYCR3Q53H96 274 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 ALG1LQ6GMV1 187 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 DOK6Q6PKX4 331 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 USP45Q70EL2 814 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 NSMCE1Q8WV22 266 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 AP2M1Q96CW1 435 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 COX14Q96I36 57 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 THAP2Q9H0W7 228 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 PCDHGA3Q9Y5H0 932 aa16.63■□□□□ 0.25
TRIM13-208ENST00000478111 PCYT1BQ9Y5K3 369 aaPredicted RBP16.63■□□□□ 0.25
TRIM13-208ENST00000478111 GOLGA6L22H0YM25 854 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 PRLP01236 227 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 ANP32AP39687 249 aaKnown RBP16.62■□□□□ 0.25
TRIM13-208ENST00000478111 ACTR1BP42025 376 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 ACTR1AP61163 376 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 NFATC3Q12968 1075 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 TRA2AQ13595 282 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM13-208ENST00000478111 TBR1Q16650 682 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 TMEM164Q5U3C3 297 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 ZNF765Q7L2R6 523 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 TRIM74Q86UV6 250 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 LRRC49Q8IUZ0 686 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 OR4D9Q8NGE8 314 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 MAML1Q92585 1016 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 NKD1Q969G9 470 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 OR2M4Q96R27 311 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 TAAR9Q96RI9 348 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 AKAP7Q9P0M2 348 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-208ENST00000478111 TMEM9Q9P0T7 183 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 RCOR3Q9P2K3 495 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-208ENST00000478111 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 PCDHB11Q9Y5F2 797 aa16.62■□□□□ 0.25
TRIM13-208ENST00000478111 MFSD11O43934 449 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 WISP1O95388 367 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 EML2O95834 649 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 CYP1A2P05177 515 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 FAM87AP0C7U9 286 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 THRAP10827 490 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 MPSTP25325 297 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 PBX1P40424 430 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 GARSP41250 739 aaKnown RBP16.61■□□□□ 0.25
TRIM13-208ENST00000478111 ZNF165P49910 485 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 STC1P52823 247 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms